Fitness data for PP_1267 in Pseudomonas putida KT2440

toxin endoribonuclease of toxin antitoxin system SohB(PrlF)-YhaV

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Glucose (C) -0.6 -1.9 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -2.5 compare
nitrogen source Ammonium chloride (N) -0.5 -1.4 compare
phage P. putida PUT 7 MOI 1 -0.5 -1.9 compare
phage P. putida South MOI 10 -0.5 -1.8 compare
carbon source Trisodium citrate (C) -0.5 -1.7 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.4 +1.8 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +1.9 compare
temperature shift Temperature shift 10_to_30 +0.4 +2.3 compare
stress Growth with Chloride 200 mM; with MOPS +0.5 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5 +1.9 compare
carbon source L-Lysine (C) +0.5 +2.0 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.5 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.5 compare
nitrogen source nitrogen source nitrite 0.5mM +0.5 +2.3 compare
no stress control Growth with no stress +0.5 +2.9 compare
stress Growth with Chloride 500 mM; with MOPS +0.6 +2.1 compare
pH Growth at pH9 and (C) Trisodium citrate +0.6 +2.5 compare
pH Growth at pH8 and (C) D-Glucose +0.6 +3.1 compare