Fitness data for PP_1261 in Pseudomonas putida KT2440

2-ketoaldonate reductase / hydroxypyruvate/glyoxylate reductase
SEED: Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-)
KEGG: gluconate 2-dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -2.4 -2.1 compare
pH Growth at pH9 and (C) Trisodium citrate -1.9 -2.6 compare
carbon source Trisodium citrate (C) -1.6 -0.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.4 -2.6 compare
nitrogen source 2,6-diaminopimelic (N) -1.4 -1.3 compare
pH Growth at pH8 and (C) D-Glucose -1.3 -1.6 compare
temperature shift Temperature shift 10_to_25 -1.1 -1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -1.0 -0.9 compare
time series Timeseries; NC condition; Bioreplicate 1; Time 5hrs; Measurement -1.0 -2.5 compare
carbon source L-Leucine (C) -1.0 -1.0 compare
carbon source 2,3-Butanediol (C) -1.0 -1.4 compare
temperature shift Temperature shift 30_to_25 -1.0 -1.3 compare
pH Growth at pH8 and (C) Trisodium citrate -0.9 -1.6 compare
nitrogen source no extra (N) -0.9 -2.4 compare
stress R2A with Fusaric 480 ug/mL +0.9 +3.6 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Asn +0.9 +2.9 compare
pH D-Glucose (C) pH 6 +1.0 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.1 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.2 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +1.2 +2.6 compare