Fitness data for PP_1254 in Pseudomonas putida KT2440

XenA
SEED: xenobiotic reductase A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -1.0 -3.2 compare
nitrogen source 2,6-diaminopimelic (N) -1.0 -1.4 compare
stress R2A with Fusaric 240 ug/mL -1.0 -2.8 compare
carbon source ferulate (C); with MOPS -0.8 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.8 -1.1 compare
supernatant LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter -0.7 -2.7 compare
phage P. putida PUT 7 MOI 1 -0.7 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.8 compare
pH Growth at pH7 and (C) Trisodium citrate -0.7 -1.3 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -0.6 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -1.5 compare
stress Growth with Chloride 200 mM +0.6 +2.2 compare
micoeukaryotes C.elegans, mixed culture-2 +0.6 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +2.2 compare
nitrogen source NAG (N); with MOPS +0.7 +1.5 compare
nitrogen source Urea (N) +0.7 +3.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.0 compare
phage PUT8 MOI 0.1 +0.7 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.4 compare
pH pH 9 +0.9 +1.9 compare