Fitness data for PP_1244 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00967463: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.6 -2.9 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -2.4 compare
carbon source Octanoic (C) -0.6 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -0.5 -2.2 compare
toxin pUC18_phdP1_pSU18T_docP1 -0.5 -2.5 compare
carbon source Myristic (C) -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.8 compare
temperature shift Temperature shift 30_to_4; with MOPS +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +2.3 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.0 compare
pH Growth at pH6 and (C) D-Glucose +0.6 +2.2 compare
carbon source 4-Methyl-2-oxopentanoic (C) +0.6 +2.8 compare
nitrogen source Urea (N); with MOPS +0.7 +2.5 compare
carbon source L-Leucine (C) +0.7 +2.8 compare
carbon source L-Leucine (C) +0.7 +1.9 compare
carbon source L-Leucine (C) +0.9 +3.3 compare