Fitness data for PP_1224 in Pseudomonas putida KT2440

periplasmic subunit of the TolQRA transport system
SEED: TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.9)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
micoeukaryotes Tetrahymena sp., Mixed culture-2 -6.0 -7.1 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -5.4 -3.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -5.0 -7.0 compare
pH Growth at pH9 and (C) D-Glucose -4.7 -9.8 compare
nitrogen source D-2-Aminobutyric (N) -4.5 -4.1 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -4.3 -6.6 compare
mixed community control Putida_ML5X alone -3.9 -7.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -3.8 -6.3 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -3.8 -6.2 compare
nitrogen source D-Lysine (N) -3.8 -7.5 compare
nitrogen source D-Lysine (N) -3.6 -8.6 compare
nitrogen source D-Alanine (N) -3.6 -8.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -3.3 -8.2 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -3.3 -7.7 compare
pH Growth at pH9 and (C) D-Glucose -3.2 -5.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -3.1 -6.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -3.0 -5.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -3.0 -6.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.9 -2.0 compare
carbon source Heptanoic (C) +3.5 +24.2 compare