Fitness data for PP_1214 in Pseudomonas putida KT2440

putative transcriptional regulatory protein
SEED: FIG000859: hypothetical protein YebC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.5)


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group condition fitness t score  
temperature shift Temperature shift 10_to_25; with MOPS -5.3 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -4.4 -2.3 compare
temperature shift Temperature shift 10_to_21; with MOPS -4.3 -4.1 compare
no stress control Growth with no stress -3.6 -3.3 compare
carbon source Tween 20 (C) -3.6 -1.9 compare
carbon source Valeric (C) -3.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -3.5 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -3.4 -3.7 compare
pH Growth at pH6 and (C) Trisodium citrate -3.3 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -3.1 -3.1 compare
carbon source 4-Methyl-2-oxopentanoic (C) -2.9 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.8 -3.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.8 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.7 -2.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.7 -3.4 compare
carbon source Hexanoic (C) -2.6 -3.0 compare
phage P. putida PUT10 MOI 0.1 -2.6 -3.5 compare
phage P. putida PUT 7 MOI 1 -2.5 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -2.5 -3.1 compare
carbon source carbon source 4-vinylphenol 0.01 mM +2.6 +2.6 compare