Fitness data for PP_1203 in Pseudomonas putida KT2440

DNA polymerase IV
SEED: DNA polymerase IV (EC 2.7.7.7)
KEGG: DNA polymerase IV

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.7 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.5 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.9 compare
temperature Growth at 30C -0.4 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -2.2 compare
pH D-Glucose (C) pH 6 -0.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.5 compare
carbon source L-Lysine (C) -0.4 -1.4 compare
nitrogen source Hippuric (N) +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4 +1.4 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +2.3 compare
pH pH 5 +0.4 +1.8 compare
temperature Growth at 25C +0.4 +1.9 compare
nitrogen source 2,6-diaminopimelic (N) +0.4 +2.0 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.5 +2.2 compare
carbon source Delta-Nonalactone (C) +0.5 +2.6 compare
carbon source Myristic (C) +0.5 +2.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.5 +1.9 compare
pH Valerolactone (C) pH 6.5 +0.6 +2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +2.0 compare