Fitness data for PP_1197 in Pseudomonas putida KT2440

ribosomal protein S12 methylthiotransferase
SEED: Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
KEGG: ribosomal protein S12 methylthiotransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source Propandiamine (N) -0.8 -3.5 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -2.5 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -2.2 compare
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.5 -2.7 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.5 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +2.2 compare
phage P. putida Sci small MOI 0.1 +0.5 +2.2 compare
phage P. putida PUT10 MOI 10 +0.5 +3.1 compare
phage PUT8 MOI 0.1 +0.6 +2.6 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.6 +3.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.5 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.7 +4.6 compare
carbon source butyrate (C) +0.7 +4.1 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.7 +3.0 compare
carbon source ferulate (C); with MOPS +0.7 +2.8 compare
phage P. putida South MOI 10 +0.8 +4.2 compare
carbon source ferulate (C); with MOPS +0.8 +4.2 compare