Fitness data for PP_1195 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: FIG00960858: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.9 compare
phage P. putida Sci Big MOI 0.1 -0.5 -2.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.4 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -2.5 compare
carbon source ferulate (C); with MOPS -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.6 compare
stress Growth with Chloride 200 mM -0.3 -1.6 compare
stress NaCl stress 250 mM -0.3 -2.2 compare
carbon source D-Glucose (C) +0.3 +1.8 compare
carbon source acetate (C) +0.3 +1.5 compare
nitrogen source NAG (N); with MOPS +0.3 +1.5 compare
pH Growth at pH7 and (C) Trisodium citrate +0.3 +1.8 compare
stress Growth with Chloride 500 mM; with MOPS +0.3 +2.2 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4 +2.1 compare
pH pH 9 +0.4 +2.0 compare
phage P. put South MOI 1 +0.4 +2.7 compare