Fitness data for PP_1176 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -5.0 -2.0 compare
carbon source D-Glucose (C); with MOPS -4.3 -2.7 compare
temperature shift Temperature shift 30_to_21; with MOPS -4.0 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -3.7 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.5 -2.6 compare
phage PUT8 MOI 0.1 -3.0 -2.5 compare
carbon source D-Glucose (C) -2.9 -2.0 compare
pH Growth at pH6 and (C) D-Glucose -2.7 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.5 -1.4 compare
microaerobic m9 microaerobic M9 -2.4 -2.2 compare
temperature shift Temperature shift 10_to_30 -2.3 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -2.2 -1.4 compare
r2a control R2A control -2.1 -1.4 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -2.1 -2.3 compare
stress R2A with Fusaric 120 ug/mL -2.1 -2.7 compare
carbon source Nonanoic (C) -1.9 -2.4 compare
temperature Growth at 25C; with MOPS -1.9 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 -1.5 compare
nitrogen source no extra (N); with MOPS -1.9 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.0 +1.9 compare