Fitness data for PP_1168 in Pseudomonas putida KT2440

D-glucuronate / D-galacturonate TRAP transporter, small permease component (from data)
Original annotation: putative TRAP dicarboxylate transporter, DctQ subunit
SEED: TRAP-type C4-dicarboxylate transport system, small permease component

All 989 fitness values, sorted by group and condition


Add gene:

Or see strongest phenotypes or choose conditions

group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +0.1 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +0.2 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.5 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.6 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.1 -0.3 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.5 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.4 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.2 -0.5 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +0.9 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.1 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 +0.9 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 +0.7 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.1 +0.2 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 +0.6 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.0 -0.1 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.5 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.2 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.4 compare
Parafilmed volatile agar plate with no fungus +0.3 +1.0 compare
Parafilmed volatile agar plate with no fungus +0.0 +0.1 compare
anaerobic m9 anaerobic M9 -0.0 -0.0 compare
anaerobic M9 -0.2 -0.8 compare
carbon source carbon source Bisabolol 45 mM -0.1 -0.5 compare
1,2-Propanediol (C) -0.2 -1.1 compare
1,2-Propanediol (C) -0.1 -0.7 compare
1,3-Butandiol (C) +0.3 +1.0 compare
1,3-Butandiol (C) -0.0 -0.3 compare
1,3-Butandiol (C) +0.0 +0.2 compare
1,3-Hexanediol (C) -0.2 -0.8 compare
1,3-Hexanediol (C) +0.2 +0.8 compare
1,4-Butanediol (C) -0.2 -0.8 compare
1,4-Butanediol (C) +0.1 +0.3 compare
1,5-Pentanediol (C) -0.2 -1.1 compare
1,5-Pentanediol (C) +0.2 +1.1 compare
1-Pentanol (C) +0.1 +0.5 compare
1-Pentanol (C) -0.1 -0.5 compare
1-Pentanol (C) +0.0 +0.0 compare
2,3-Butanediol (C) +0.2 +1.1 compare
2,3-Butanediol (C) +0.3 +1.8 compare
carbon source 2-Deoxy-D-glucose 10 mM -0.2 -0.8 compare
carbon source 2-Deoxy-D-glucose 50 mM +0.1 +0.4 compare
carbon source 2-Deoxy-D-glucose 100 mM -0.3 -0.9 compare
2-Keto-D-gluconic hemicalcium salt (C) +0.3 +1.2 compare
2-Keto-D-gluconic hemicalcium salt (C) +0.1 +0.6 compare
2-methyl-1-butanol (C) -0.0 -0.2 compare
2-methyl-1-butanol (C) -0.2 -1.1 compare
2-Methylbutanoic (C) -0.1 -0.6 compare
2-Methylbutanoic (C) -0.3 -1.2 compare
Valerolactam (C) -0.3 -1.6 compare
Valerolactam 10 mM (C) +0.2 +0.8 compare
3-Hydroxydecanoic (C) -0.2 -0.7 compare
3-Hydroxydecanoic (C) +0.4 +1.7 compare
3-Hydroxyhexanoic (C) +0.3 +1.3 compare
3-Hydroxyhexanoic (C) +0.3 +1.4 compare
3-Hydroxypropionate (C) +0.1 +0.6 compare
3-Hydroxypropionate (C) +0.0 +0.1 compare
3-methyl-1-butanol 0.1 vol% (C) -0.3 -1.1 compare
3-methyl-1-butanol 0.25 vol% (C) -0.0 -0.0 compare
3-methyl-1-butanol (C) -0.2 -1.0 compare
3-methyl-1-butanol (C) -0.1 -0.3 compare
3-Methyl-2-Oxobutanoic Acid (C) +0.0 +0.3 compare
3-Methyl-2-Oxobutanoic Acid (C) -0.4 -1.5 compare
3-methyl-2-oxopentanoic (C) -0.1 -0.6 compare
3-methyl-2-oxopentanoic (C) -0.3 -1.7 compare
3-methyl-3-buten-1-ol 0.1 vol% (C) -0.2 -1.2 compare
3-methyl-3-buten-1-ol 0.25 vol% (C) -0.2 -1.1 compare
3-methyl-3-butenol (C) -0.3 -1.2 compare
3-methyl-3-butenol (C) +0.0 +0.0 compare
carbon source 3-O-methyl-glucose 10 mM -0.3 -1.1 compare
carbon source 3-O-methyl-glucose 50 mM -0.5 -1.6 compare
4-Aminobutyric 10 mM (C) -0.3 -1.0 compare
4-Hydroxybenzoic Acid (C) +0.1 +0.9 compare
4-Hydroxybenzoic Acid (C) +0.3 +1.8 compare
4-Hydroxybenzoic Acid (C) -0.0 -0.0 compare
4-Hydroxyvalerate (C) (40mM) +0.3 +1.3 compare
4-Hydroxyvalerate (C) (40mM) +0.3 +1.3 compare
4-Methyl-2-oxopentanoic (C) +0.1 +0.4 compare
4-Methyl-2-oxopentanoic (C) -0.4 -1.1 compare
4-Methyl-2-oxopentanoic (C) +0.1 +0.4 compare
4-Methyl-2-oxopentanoic (C) -0.0 -0.2 compare
carbon source 4-vinylphenol 0.01 mM -0.1 -0.3 compare
carbon source 4-vinylphenol 0.1 mM -0.5 -1.4 compare
5-Aminovaleric 10 mM (C) +0.1 +0.3 compare
5-Aminovaleric 10 mM (C) -0.3 -1.5 compare
5-Hydroxydodecanoate (C) +0.1 +0.4 compare
5-Hydroxydodecanoate (C) +0.3 +1.6 compare
a-Ketoglutaric (C) -0.2 -0.8 compare
BC Lignin Sorghum 10 vol% (C) -0.4 -1.6 compare
BC Lignin Sorghum 20 vol% (C) -0.4 -2.2 compare
benzoic (C) -0.0 -0.3 compare
benzoic (C) +0.3 +1.4 compare
benzoic (C) -0.1 -0.3 compare
Beta-alanine (C) -0.0 -0.1 compare
Beta-alanine (C) +0.0 +0.0 compare
carbon source Bisabolene 48.9 mM -0.1 -0.4 compare
Butanol (C) +0.1 +0.8 compare
Butanol (C) +0.1 +0.8 compare
Butanol (C) +0.1 +0.9 compare
Butyl stearate (C) -0.1 -0.3 compare
Butyl stearate (C) +0.0 +0.3 compare
Cholinium lysinate (C) -0.2 -1.2 compare
Crotonic (C) +0.1 +0.2 compare
D,L-Malic Acid (C) +0.1 +0.3 compare
D-Fructose (C) +0.4 +1.8 compare
D-Fructose (C) -0.1 -0.6 compare
D-Fructose (C) -0.1 -0.8 compare
D-Galacturonic Acid (C) -5.4 -3.8 compare
D-Galacturonic Acid (C) -5.0 -5.9 compare
D-Glucaric (C) -0.4 -1.6 compare
D-Glucaric (C) +0.0 +0.0 compare
D-Glucose (C) 1.25 mM +0.1 +0.4 compare
D-Glucose (C) 2.5 mM -0.0 -0.1 compare
D-Glucose (C) 5 mM -0.0 -0.0 compare
D-Glucose (C) +0.1 +0.5 compare
D-Glucose (C) 10 mM -0.1 -0.6 compare
M9 minimal media_noCarbon with D-Glucose 10 mM; 30C +0.1 +0.3 compare
M9 minimal media_noCarbon with D-Glucose 10 mM; 30C +0.2 +1.3 compare
M9 minimal media_noCarbon with D-Glucose 10 mM; 15C +0.1 +0.8 compare
M9 minimal media_noCarbon with D-Glucose 10 mM; 15C +0.0 +0.2 compare
Soil Extract with D-Glucose 10 mM; 30C +0.1 +0.4 compare
Soil Extract with D-Glucose 10 mM; 30C -0.0 -0.1 compare
Soil Extract with D-Glucose 10 mM; 15C +0.2 +1.2 compare
Soil Extract with D-Glucose 10 mM; 15C +0.2 +1.0 compare
M9 minimal media_noCarbon with D-Glucose 10 mM; 30C; then outgrowth in LB +0.1 +0.8 compare
M9 minimal media_noCarbon with D-Glucose 10 mM; 30C; then outgrowth in LB -0.1 -0.5 compare
Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -0.1 -0.6 compare
Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -0.0 -0.1 compare
D-Glucose (C) -0.1 -0.6 compare
Glucose (C) (20mM) -0.2 -0.8 compare
Glucose (C) (20mM) -0.0 -0.1 compare
D-Glucose (C) +0.2 +0.9 compare
D-Glucose (C) +0.1 +0.4 compare
Glucose (C) (40mM) -0.2 -1.0 compare
Glucose (C) (40mM) +0.1 +0.4 compare
carbon source D-Glucose 55.5 mM -1.2 -3.0 compare
D-Glucose (C) with 20AA_mix +0.1 +0.3 compare
D-Glucose (C) with 20AA_mix_minus_Ala +0.0 +0.3 compare
D-Glucose (C) with 20AA_mix_minus_Arg -0.1 -0.6 compare
D-Glucose (C) with 20AA_mix_minus_Asn +0.1 +0.5 compare
D-Glucose (C) with 20AA_mix_minus_Asp +0.1 +0.3 compare
D-Glucose (C) with 20AA_mix_minus_Cys -0.1 -0.2 compare
D-Glucose (C) with 20AA_mix_minus_Gln +0.1 +0.5 compare
D-Glucose (C) with 20AA_mix_minus_Glu -0.1 -0.3 compare
D-Glucose (C) with 20AA_mix_minus_Gly +0.0 +0.1 compare
D-Glucose (C) with 20AA_mix_minus_His +0.1 +0.4 compare
D-Glucose (C) with 20AA_mix_minus_Ile +0.0 +0.2 compare
D-Glucose (C) with 20AA_mix_minus_Leu -0.0 -0.2 compare
D-Glucose (C) with 20AA_mix_minus_Lys -0.0 -0.0 compare
D-Glucose (C) with 20AA_mix_minus_Met +0.2 +1.0 compare
D-Glucose (C) with 20AA_mix_minus_Pro -0.0 -0.1 compare
D-Glucose (C) with 20AA_mix_minus_Ser -0.1 -0.7 compare
D-Glucose (C) with 20AA_mix_minus_Thr -0.0 -0.0 compare
D-Glucose (C) with 20AA_mix_minus_Trp +0.1 +0.4 compare
D-Glucose (C) with 20AA_mix_minus_Tyr +0.1 +0.5 compare
D-Glucose (C) with 20AA_mix_minus_Val +0.1 +0.4 compare
D-Glucose (C) +0.4 +1.0 compare
D-Glucose (C) -0.1 -0.3 compare
D-Glucose (C) -0.0 -0.0 compare
D-Glucose (C); with MOPS +0.5 +1.6 compare
D-Glucose (C); with MOPS +0.1 +0.3 compare
D-Glucose; D-Xylose (C) -0.0 -0.2 compare
D-Glucose; D-Xylose; p-Coumaric; benzoic acid (C) -0.2 -1.3 compare
D-Glucose (C) -0.0 -0.2 compare
D-Glucose (C) -0.2 -1.4 compare
D-Glucuronic Acid (C) -2.8 -8.0 compare
D-Glucuronic gamma lactone (C) -4.8 -6.6 compare
D-Glucuronic gamma lactone (C) -4.7 -7.2 compare
D-Lysine 10 mM (C) -0.3 -1.3 compare
D-Lysine 10 mM (C) -0.1 -0.5 compare
D-Mannose (C) +0.1 +0.6 compare
carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.6 -1.9 compare
Decanoic (C) +0.1 +0.4 compare
Decanoic (C) +0.2 +1.0 compare
Decanoic (C) -0.2 -0.9 compare
Delta-Decalactone (C) -0.0 -0.1 compare
Delta-Decalactone (C) -0.2 -0.8 compare
Delta-Dodecalactone (C) -0.0 -0.1 compare
Delta-Dodecalactone (C) -0.0 -0.2 compare
Delta-Nonalactone (C) +0.1 +0.6 compare
Delta-Undecalactone (C) -0.1 -0.5 compare
Delta-Undecalactone (C) -0.0 -0.2 compare
DL-2-Aminoadipic 10 mM (C) +0.2 +0.8 compare
DL-3-Hydroxybutyric (C) -0.3 -1.1 compare
DL-3-Hydroxybutyric (C) -0.3 -0.9 compare
DL-3-Hydroxyisobutyric (C) -0.4 -1.6 compare
DL-3-Hydroxyisobutyric (C) +0.1 +0.5 compare
Ethanol (C) +0.1 +0.3 compare
Ethanol (C) -0.0 -0.0 compare
Ethanol (C) -0.1 -0.6 compare
Ethyl decanoate (C) +0.2 +1.3 compare
Ethyl decanoate (C) +0.3 +1.8 compare
Ethyl decanoate and D-Glucose (C)s +0.3 +1.3 compare
Ethyl decanoate and D-Glucose (C)s +0.3 +1.8 compare
Ferulic Acid (C) -0.2 -0.8 compare
Ferulic Acid (C) -0.2 -1.2 compare
Ferulic Acid (C) +0.1 +0.7 compare
Glutaric (C) +0.4 +2.4 compare
Glutaric (C) +0.2 +1.2 compare
carbon source Glycerol 108.6 mM -0.3 -1.0 compare
Glycerol (C) -0.1 -0.9 compare
Glycerol (C) +0.1 +0.6 compare
Heptanoic (C) +0.2 +1.1 compare
Heptanoic (C) +0.1 +0.6 compare
Heptanoic (C) +0.1 +0.5 compare
Hexanoic (C) +0.2 +0.7 compare
Hexanoic (C) -0.2 -0.7 compare
Hexanoic (C) -0.0 -0.2 compare
Hydroxy-L-Proline (C) +0.1 +0.3 compare
Hydroxy-L-Proline (C) -0.2 -1.3 compare
L-Alanine (C) +0.4 +1.6 compare
L-Arginine (C) +0.2 +1.2 compare
L-Glutamic (C) +0.2 +0.9 compare
L-Glutamic (C) +0.1 +0.4 compare
L-Glutamic (C) -0.1 -0.7 compare
L-Glutamine (C) +0.2 +0.8 compare
L-Histidine (C) +0.0 +0.3 compare
L-Isoleucine (C) -0.1 -0.7 compare
L-Isoleucine (C) -0.1 -0.5 compare
L-Leucine (C) -0.3 -0.9 compare
L-Leucine (C) +0.2 +0.8 compare
L-Leucine (C) -0.3 -1.4 compare
L-Lysine (C) -0.2 -0.6 compare
L-Lysine 10 mM (C) -0.1 -0.3 compare
L-Lysine (C) -0.2 -0.9 compare
L-Lysine (C) -0.2 -1.0 compare
L-Phenylalanine 5 mM (C) +0.1 +0.3 compare
L-Phenylalanine 5 mM (C) +0.4 +1.5 compare
L-Phenylalanine 5 mM (C) -0.1 -0.5 compare
L-Proline (C) +0.5 +2.5 compare
L-tyrosine 5 mM (C) +0.2 +0.9 compare
L-tyrosine 5 mM (C) +0.1 +0.7 compare
L-tyrosine 5 mM (C) +0.3 +1.7 compare
L-Valine (C) +0.1 +0.4 compare
L-Valine (C) -0.0 -0.1 compare
L-Valine (C) +0.2 +1.1 compare
Lauric (C) +0.5 +2.1 compare
Lauric (C) +0.1 +0.7 compare
Lauric (C) +0.2 +1.4 compare
Levulinic Acid (C) -0.2 -0.8 compare
Levulinic Acid (C) +0.2 +0.8 compare
Levulinic Acid (C) -0.3 -1.7 compare
Levulinic Acid (C) +0.1 +0.2 compare
Lignin Monomers (C) -0.3 -1.1 compare
Lignin Monomers (C) -0.0 -0.1 compare
Mucic (C) +0.1 +0.6 compare
Mucic (C) +0.2 +0.9 compare
Myristic (C) +0.1 +0.4 compare
Myristic (C) +0.1 +0.5 compare
Myristic (C) +0.0 +0.3 compare
Nonanoic (C) -0.1 -0.3 compare
Nonanoic (C) +0.0 +0.1 compare
Nonanoic (C) +0.0 +0.1 compare
Octanoic (C) +0.1 +0.4 compare
Octanoic (C) +0.1 +0.2 compare
Octanoic (C) -0.0 -0.2 compare
Oleic (C) -0.1 -0.8 compare
Oleic (C) +0.1 +0.7 compare
p-Coumaric (C) -0.2 -0.8 compare
p-Coumaric (C) +0.3 +1.1 compare
p-Coumaric (C) -0.0 -0.0 compare
p-Coumaric (C) -0.1 -0.7 compare
p-Coumaric (C) -0.1 -0.6 compare
Phenylacetic (C) +0.2 +1.0 compare
Phenylacetic (C) -0.1 -0.7 compare
Acetate Carbon Source (5mM) -0.1 -0.4 compare
Acetate Carbon Source (5mM) +0.4 +2.4 compare
Acetate Carbon Source (20mM) -0.3 -1.6 compare
Acetate Carbon Source (20mM) -0.3 -1.2 compare
Protocatechuic Acid (C) +0.0 +0.0 compare
Protocatechuic Acid (C) -0.5 -3.2 compare
Protocatechuic Acid (C) -0.3 -1.5 compare
Protocatechuic Acid (C) -0.0 -0.2 compare
Quinic Acid (C) +0.1 +0.6 compare
Quinic Acid (C) +0.0 +0.0 compare
3-hydroxypentanoate -0.1 -0.7 compare
rac-3-Hydroxypentanoic Acid (C) +0.3 +1.6 compare
rac-3-Hydroxypentanoic Acid (C) +0.3 +1.2 compare
Rhamnogalacturonan - from potato (C) -1.7 -6.2 compare
Rhamnogalacturonan - from potato (C) -1.4 -4.3 compare
Sebacic (C) +0.2 +1.1 compare
Sebacic (C) -0.1 -0.5 compare
acetate (C) +0.0 +0.2 compare
acetate (C) -0.1 -0.2 compare
butyrate (C) -0.0 -0.1 compare
butyrate (C) +0.1 +0.4 compare
butyrate (C) +0.2 +0.7 compare
ferulate (C); with MOPS +0.4 +0.8 compare
ferulate (C); with MOPS +0.1 +0.3 compare
ferulate (C); with MOPS +0.4 +0.9 compare
gluconate (C) +0.1 +0.4 compare
gluconate (C) +0.2 +1.0 compare
propionate (C) +0.2 +1.0 compare
propionate (C) -0.1 -0.5 compare
pyruvate (C) -0.1 -0.7 compare
succinate (C) -0.0 -0.1 compare
Sorghum Hydrolysate (C) -0.2 -1.0 compare
Sorghum Hydrolysate (C) -0.2 -1.3 compare
Succinic Acid (C) +0.0 +0.0 compare
Succinic Acid (C) +0.3 +1.3 compare
Trisodium citrate (C) -0.0 -0.2 compare
M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C +0.1 +0.8 compare
M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C -0.2 -1.5 compare
Soil Extract with Trisodium citrate 10 mM; 30C -0.0 -0.1 compare
Soil Extract with Trisodium citrate 10 mM; 30C +0.1 +0.7 compare
M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C; then outgrowth in LB -0.3 -1.2 compare
M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C; then outgrowth in LB -0.0 -0.1 compare
Trisodium citrate 10 mM (C) +0.1 +0.7 compare
Trisodium citrate (C) -0.0 -0.1 compare
Tween 20 (C) +0.2 +0.7 compare
Tween 20 (C) +0.3 +0.9 compare
Valeric (C) -0.7 -1.8 compare
Valeric (C) -0.0 -0.2 compare
Valeric (C) +0.0 +0.1 compare
Valerolactone (C) -0.2 -0.6 compare
Valerolactone (C) +0.1 +0.3 compare
Vanillic Acid (C) -0.1 -0.8 compare
Vanillic Acid (C) +0.1 +0.5 compare
Vanillic Acid (C) -0.2 -1.2 compare
Vanillin (C) +0.3 +1.6 compare
Vanillin (C) -0.1 -0.3 compare
Vanillin (C) -0.1 -0.3 compare
Vanillin (C) -0.0 -0.1 compare
control NoPredeControl -0.0 -0.2 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.1 -0.5 compare
LB 0.1x with 55.5 mM D-Glucose -0.5 -2.5 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.3 compare
Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.3 compare
Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.5 compare
Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.6 compare
Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 -0.1 compare
Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.1 +0.4 compare
Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.0 +0.1 compare
Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.1 +0.3 compare
Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.1 +0.2 compare
Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.1 -0.5 compare
Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.1 +0.4 compare
Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.0 -0.0 compare
Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.0 compare
Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.5 compare
Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.1 compare
Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.0 compare
Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.2 +1.0 compare
Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +0.5 compare
Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.0 -0.1 compare
Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.2 -1.0 compare
Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.1 compare
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.5 +1.7 compare
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.1 +0.3 compare
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.2 -0.5 compare
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.6 compare
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.1 +0.3 compare
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.2 +0.9 compare
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.1 -0.2 compare
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.0 +0.0 compare
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.2 +0.7 compare
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.1 compare
lb LB -0.1 -0.7 compare
LB -0.1 -0.5 compare
LB -0.0 -0.2 compare
LB -0.1 -0.4 compare
LB_control +0.0 +0.2 compare
lb outgrowth control LB outgrowth control +0.1 +0.5 compare
LB outgrowth control -0.1 -0.8 compare
LB outgrowth control -0.0 -0.1 compare
lb outgrowth control more dilute start LB outgrowth control more dilute start -0.0 -0.1 compare
LB outgrowth control more dilute start +0.1 +0.5 compare
LB outgrowth control more dilute start -0.0 -0.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.1 -0.3 compare
Acanthamoeba sp., muxed culture-2 +0.4 +1.8 compare
C.elegans, mixed culture-1 +0.1 +0.3 compare
C.elegans, mixed culture-2 +0.0 +0.1 compare
Dictyostellum sp.mixed culture-1 -0.2 -0.7 compare
Dictyostellum sp.mixed culture-2 -0.0 -0.1 compare
Tetrahymena sp., Mixed culture-1 -0.4 -1.8 compare
Tetrahymena sp., Mixed culture-2 +0.1 +0.5 compare
microaerobic m9 microaerobic M9 +0.2 +0.9 compare
microaerobic M9 -0.1 -0.8 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.1 +0.5 compare
mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.0 -0.0 compare
mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.1 -0.4 compare
mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.3 -1.2 compare
mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.1 -0.3 compare
mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.0 +0.2 compare
mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM -0.0 -0.0 compare
mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.0 +0.0 compare
mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.3 -1.4 compare
mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.1 -0.3 compare
mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.0 -0.1 compare
mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.4 -1.7 compare
mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.2 -1.0 compare
mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -0.4 -1.5 compare
mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM +0.0 +0.3 compare
mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM +0.2 +1.2 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant +0.1 +0.4 compare
mixed community control Putida_ML5X alone +0.1 +0.6 compare
nitrogen source 1,6-Hexanediamine (N) -0.0 -0.2 compare
1,6-Hexanediamine (N) +0.1 +0.8 compare
2,6-diaminopimelic (N) +0.4 +1.3 compare
2,6-diaminopimelic (N) -0.5 -1.4 compare
2,6-diaminopimelic (N) +0.0 +0.1 compare
2,6-diaminopimelic (N) +0.2 +1.5 compare
Propiolactam (N) -0.0 -0.1 compare
Propiolactam (N) +0.3 +1.4 compare
Valerolactam (N) -0.3 -1.7 compare
Valerolactam (N) -0.1 -0.6 compare
3,5-Dinitrosalicylic (N) -0.1 -0.6 compare
3-aminobutyric (N) +0.1 +0.4 compare
3-aminobutyric (N) +0.1 +0.5 compare
4-aminobutyric (N) +0.1 +0.3 compare
4-aminobutyric (N) +0.1 +0.9 compare
4-Aminobutyric (N) +0.0 +0.2 compare
4-Aminobutyric (N) -0.1 -0.5 compare
4-Guanidinobutyric (N) +0.2 +0.9 compare
4-Guanidinobutyric (N) +0.0 +0.2 compare
5-Aminovaleric (N) -0.0 -0.2 compare
5-Aminovaleric (N) -0.1 -0.4 compare
Adenine (N) +0.1 +0.5 compare
Adenine (N) -0.0 -0.1 compare
Ammonium chloride (N) -0.1 -0.3 compare
Ammonium chloride (N) -0.1 -0.6 compare
nitrogen source Ammonium chloride 20mM -0.1 -0.7 compare
nitrogen source Ammonium chloride 20mM +0.5 +1.9 compare
Ammonium chloride (N) -0.2 -0.8 compare
Ammonium chloride (N) -0.3 -1.5 compare
Ammonium chloride (N) -0.2 -0.9 compare
Ammonium chloride and TNT (N) -0.1 -0.3 compare
Ammonium chloride and TNT (N) -0.1 -0.4 compare
Ammonium chloride and TNT (N) -0.1 -0.3 compare
Ammonium chloride and TNT (N) -0.0 -0.0 compare
Beta-alanine (N) -0.0 -0.1 compare
Beta-alanine (N) -0.1 -0.6 compare
Betaine (N) -0.1 -0.4 compare
Betaine (N) +0.4 +2.1 compare
Butyrolactam (N) +0.1 +1.0 compare
Butyrolactam (N) +0.1 +0.8 compare
Cadaverine (N) +0.1 +0.8 compare
Cadaverine (N) +0.1 +0.6 compare
Caprolactam (N) -0.1 -0.3 compare
Caprolactam (N) +0.1 +0.7 compare
Caprolactam (N) +0.3 +1.8 compare
Caprolactam (N) +0.4 +1.7 compare
Carnitine Hydrochloride (N) +0.1 +0.3 compare
Carnitine Hydrochloride (N) +0.3 +1.9 compare
Choline chloride (N) +0.1 +0.5 compare
Choline chloride (N) +0.2 +0.9 compare
Cytosine (N) -0.0 -0.2 compare
Cytosine (N) +0.1 +0.6 compare
D-2-Aminobutyric (N) -0.2 -0.6 compare
D-2-Aminobutyric (N) -0.8 -2.0 compare
D-Alanine (N) -0.0 -0.2 compare
D-Alanine (N) -0.0 -0.0 compare
no extra (N) -0.2 -1.2 compare
no extra (N) +0.2 +0.8 compare
no extra (N) +0.2 +1.1 compare
no extra (N); with MOPS -0.4 -1.2 compare
no extra (N); with MOPS +0.1 +0.5 compare
Ammonium chloride (N) +0.2 +0.8 compare
Ammonium chloride (N) +0.3 +0.7 compare
Ammonium chloride (N); with MOPS +0.3 +1.2 compare
NAG (N) +0.1 +0.3 compare
NAG (N) -0.0 -0.1 compare
NAG (N) +0.3 +1.3 compare
NAG (N); with MOPS +0.0 +0.0 compare
NAG (N); with MOPS +0.8 +2.4 compare
nitrate (N) +0.1 +0.3 compare
nitrate (N) -0.3 -0.7 compare
nitrate (N) +0.6 +2.4 compare
nitrite (N) -0.2 -0.8 compare
nitrite (N) -0.1 -0.5 compare
nitrite (N) +0.0 +0.1 compare
Urea (N) +0.2 +0.5 compare
Urea (N) +0.5 +2.4 compare
Urea (N) +0.2 +0.5 compare
Urea (N); with MOPS +0.6 +1.8 compare
D-Lysine (N) -0.1 -0.5 compare
D-Lysine (N) -0.1 -0.5 compare
DL-2-Aminobutyric (N) +0.0 +0.1 compare
DL-2-Aminobutyric (N) -0.1 -0.5 compare
DL-3-Aminoisobutyric (N) +0.2 +1.0 compare
DL-3-Aminoisobutyric (N) +0.2 +0.9 compare
6-aminocaproic (N) +0.3 +1.7 compare
6-aminocaproic (N) +0.1 +0.3 compare
Ethanolamine (N) -0.0 -0.1 compare
Ethanolamine (N) +0.2 +0.9 compare
Glycine (N) -0.0 -0.2 compare
Glycine (N) -0.1 -0.5 compare
Hippuric (N) -0.8 -3.2 compare
Hippuric (N) -0.3 -1.5 compare
Hydantoin (N) -0.0 -0.0 compare
Hydantoin (N) +0.2 +0.9 compare
Hydantoin (N) +0.0 +0.2 compare
Hydantoin (N) -0.1 -0.4 compare
Imidazole (N) +0.3 +1.2 compare
L-Alanine (N) -0.2 -1.0 compare
L-Alanine (N) -0.0 -0.1 compare
L-Arginine (N) +0.1 +1.0 compare
L-Arginine (N) -0.1 -0.3 compare
L-Asparagine (N) -0.0 -0.2 compare
L-Asparagine (N) +0.1 +0.8 compare
L-Aspartate (N) +0.1 +1.1 compare
L-Aspartate (N) +0.2 +1.1 compare
L-Cysteine (N) +0.3 +1.8 compare
L-Cysteine (N) +0.0 +0.1 compare
L-Glutamic (N) -0.0 -0.2 compare
L-Glutamic (N) +0.2 +0.9 compare
L-Glutamine (N) -0.0 -0.1 compare
L-Glutamine (N) -0.2 -1.0 compare
L-Histidine (N) +0.1 +0.5 compare
L-Histidine (N) +0.1 +0.8 compare
L-Isoleucine (N) -0.0 -0.2 compare
L-Isoleucine (N) +0.1 +0.3 compare
L-Leucine (N) -0.0 -0.2 compare
L-Leucine (N) -0.0 -0.1 compare
L-Lysine (N) -0.1 -0.5 compare
L-Lysine (N) +0.0 +0.0 compare
L-Methionine (N) +0.1 +0.6 compare
L-Methionine (N) -0.2 -1.1 compare
L-Ornithine (N) -0.0 -0.3 compare
L-Ornithine (N) -0.3 -1.5 compare
L-Phenylalanine (N) +0.1 +0.6 compare
L-Phenylalanine (N) -0.0 -0.2 compare
L-Pipecolic Acid (N) +0.2 +0.8 compare
L-Pipecolic Acid (N) -0.1 -0.4 compare
L-Proline (N) -0.1 -0.7 compare
L-Proline (N) -0.1 -0.7 compare
L-pyroglutamic (N) -0.1 -0.4 compare
L-pyroglutamic (N) +0.0 +0.2 compare
L-Serine (N) -0.0 -0.3 compare
L-Serine (N) -0.0 -0.1 compare
L-Threonine (N) -0.0 -0.1 compare
L-Threonine (N) +0.0 +0.2 compare
L-Valine (N) +0.1 +0.8 compare
L-Valine (N) +0.1 +0.7 compare
Nicotinic Acid (N) +0.2 +1.5 compare
Nicotinic Acid (N) +0.1 +0.4 compare
Propandiamine (N) -0.1 -0.2 compare
Propandiamine (N) -0.0 -0.0 compare
Putrescine (N) +0.0 +0.3 compare
Putrescine (N) +0.0 +0.2 compare
Putrescine (N) +0.1 +0.4 compare
nitrogen source nitrate 5mM +0.1 +0.3 compare
nitrogen source nitrate 5mM +0.4 +1.7 compare
nitrate (N) +0.0 +0.2 compare
nitrate (N) -0.2 -1.3 compare
nitrogen source nitrate 20mM -0.2 -0.8 compare
nitrogen source nitrate 20mM +0.4 +1.6 compare
nitrogen source nitrite 0.5mM +0.0 +0.0 compare
nitrogen source nitrite 0.5mM -0.2 -0.6 compare
nitrogen source nitrite 1mM +0.0 +0.1 compare
nitrogen source nitrite 1mM +0.2 +0.4 compare
nitrite (N) -0.1 -0.5 compare
nitrite (N) -0.2 -0.9 compare
spermidine (N) -0.1 -0.4 compare
spermidine (N) +0.1 +0.3 compare
TNT (N) +0.2 +0.9 compare
TNT (N) +0.1 +0.5 compare
TNT (N) -0.0 -0.0 compare
TNT (N) +0.1 +0.3 compare
Uracil (N) -0.1 -0.6 compare
Uracil (N) +0.0 +0.1 compare
Urea (N) +0.1 +0.7 compare
Urea (N) -0.1 -0.6 compare
no phage control Time6-nophage +0.2 +0.8 compare
Time6-nophage -0.1 -0.6 compare
Time6-nophage +0.1 +0.3 compare
No phage control +0.2 +1.2 compare
No phage control +0.4 +1.9 compare
No phage control +0.0 +0.1 compare
no stress control Growth with no stress +0.4 +1.5 compare
Growth with no stress +0.3 +1.1 compare
Growth with no stress +0.3 +1.3 compare
TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1 +0.0 +0.1 compare
TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1 -0.0 -0.4 compare
TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1 +0.2 +1.2 compare
nophagecontrol No phage control +0.1 +0.7 compare
No phage control +0.2 +1.4 compare
TIme6-nophage +0.2 +1.2 compare
TIme6-nophage +0.0 +0.0 compare
TIme6-nophage +0.2 +0.9 compare
pH D-Glucose (C) pH 6 -0.4 -1.3 compare
D-Glucose (C) pH 6 -0.2 -0.6 compare
D-Glucose (C) pH 6.5 -0.1 -0.5 compare
D-Glucose (C) pH 6.5 -0.1 -0.6 compare
D-Glucose (C) pH 7 -0.1 -0.5 compare
D-Glucose (C) pH 7 -0.4 -1.7 compare
D-Glucose (C) pH 7.5 -0.2 -0.8 compare
D-Glucose (C) pH 7.5 -0.0 -0.2 compare
pH 4 -0.3 -0.8 compare
pH 5 -0.1 -0.4 compare
pH 6 -0.4 -1.6 compare
pH 7 -0.0 -0.1 compare
pH 8 +0.1 +0.2 compare
pH 9 -0.4 -0.9 compare
LB 0.1x with 55.5 mM D-Glucose; pH 4.6 +0.1 +0.4 compare
Growth at pH7 and (C) D-Glucose +0.1 +0.4 compare
Growth at pH7 and (C) D-Glucose +0.4 +1.0 compare
Growth at pH9 and (C) D-Glucose +0.1 +0.6 compare
Growth at pH9 and (C) D-Glucose +0.4 +1.9 compare
Growth at pH9 and (C) D-Glucose +0.3 +1.8 compare
Growth at pH9 and (C) D-Glucose +0.1 +0.6 compare
Growth at pH9 and (C) D-Glucose +0.2 +0.9 compare
Growth at pH9 and (C) D-Glucose +0.3 +1.2 compare
Growth at pH6 and (C) D-Glucose +0.2 +0.4 compare
Growth at pH6 and (C) D-Glucose +0.6 +1.5 compare
Growth at pH6 and (C) D-Glucose +0.4 +1.0 compare
Growth at pH6 and (C) D-Glucose +0.4 +1.9 compare
Growth at pH6 and (C) D-Glucose +0.2 +0.6 compare
Growth at pH6 and (C) D-Glucose +0.3 +1.6 compare
Growth at pH8 and (C) D-Glucose -0.4 -1.0 compare
Growth at pH8 and (C) D-Glucose +0.3 +0.8 compare
Growth at pH8 and (C) D-Glucose +0.1 +0.2 compare
Growth at pH8 and (C) D-Glucose +0.3 +1.1 compare
Growth at pH7 and (C) Trisodium citrate +0.7 +2.4 compare
Growth at pH7 and (C) Trisodium citrate -0.3 -0.8 compare
Growth at pH7 and (C) Trisodium citrate +0.1 +0.2 compare
Growth at pH9 and (C) Trisodium citrate +0.3 +1.4 compare
Growth at pH9 and (C) Trisodium citrate +0.1 +0.3 compare
Growth at pH9 and (C) Trisodium citrate -0.1 -0.1 compare
Growth at pH9 and (C) Trisodium citrate +0.4 +1.7 compare
Growth at pH6 and (C) Trisodium citrate +0.2 +0.9 compare
Growth at pH6 and (C) Trisodium citrate -0.0 -0.1 compare
Growth at pH6 and (C) Trisodium citrate +0.1 +0.4 compare
Growth at pH6 and (C) Trisodium citrate -0.3 -1.1 compare
Growth at pH6 and (C) Trisodium citrate +0.3 +0.8 compare
Growth at pH6 and (C) Trisodium citrate +0.1 +0.3 compare
Growth at pH8 and (C) Trisodium citrate -0.2 -0.5 compare
Growth at pH8 and (C) Trisodium citrate +0.1 +0.3 compare
Valerolactone (C) pH 6.5 +0.0 +0.1 compare
Valerolactone (C) pH 6.5 -0.7 -2.1 compare
phage P. put PUT 10 MOI 0.1 -0.3 -1.2 compare
P. put PUT 10 MOI 0.1 +0.1 +0.5 compare
P. put PUT 10 MOI 1 -0.1 -0.6 compare
P. put PUT 10 MOI 1 +0.3 +1.4 compare
P. put PUT 10 MOI 10 +0.1 +0.7 compare
P. put PUT 10 MOI 10 +0.2 +0.7 compare
P. put South MOI 0.1 +0.1 +0.7 compare
P. put South MOI 0.1 +0.2 +0.9 compare
P. put South MOI 1 +0.2 +0.9 compare
P. put South MOI 1 +0.1 +0.4 compare
P. put South MOI 10 +0.1 +0.2 compare
P. putida compost MOI 0.1 +0.1 +0.4 compare
P. putida compost MOI 0.1 -0.1 -0.5 compare
P. putida Missley MOI 0.1 +0.7 +2.6 compare
P. putida PUT 7 MOI 1 +0.0 +0.0 compare
P. putida PUT10 MOI 0.1 +0.4 +1.6 compare
P. putida PUT10 MOI 0.1 +0.1 +0.4 compare
P. putida PUT10 MOI 1 +0.2 +1.0 compare
P. putida PUT10 MOI 1 +0.2 +1.1 compare
P. putida PUT10 MOI 10 +0.1 +0.6 compare
P. putida PUT10 MOI 10 +0.3 +1.6 compare
P. putida Sci Big MOI 0.1 +0.1 +0.3 compare
P. putida Sci small MOI 0.1 -0.0 -0.1 compare
P. putida Sci small MOI 0.1 -0.8 -2.4 compare
P. putida South MOI 0.1 +0.3 +1.2 compare
P. putida South MOI 0.1 +0.4 +1.8 compare
P. putida South MOI 1 +0.2 +0.9 compare
P. putida South MOI 10 +0.3 +0.6 compare
P. putida South MOI 10 +0.5 +1.6 compare
PUT 8 MOI 1 +0.1 +0.3 compare
PUT8 MOI 0.1 +0.2 +0.7 compare
PUT8 MOI 0.1 -0.2 -0.7 compare
PUT8 MOI 10 -0.3 -1.7 compare
PUT8 MOI 10 -0.6 -2.2 compare
phage moi 100 Time6-phageFRS -0.3 -1.5 compare
Time6-phageFRS +0.1 +0.3 compare
Time6-phageFRS -0.3 -1.4 compare
phagefrs Time6-FRS +0.2 +1.2 compare
Time6-FRS -0.1 -0.3 compare
Time6-FRS -0.1 -0.7 compare
r2a control R2A control +0.0 +0.3 compare
R2A control -0.0 -0.3 compare
R2A control +0.1 +0.5 compare
R2A control +0.2 +1.0 compare
R2A control -0.0 -0.0 compare
R2A control +0.1 +0.3 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.3 +0.9 compare
R2A control with 0.2% methanol +0.2 +1.0 compare
R2A control with 0.2% methanol +0.0 +0.1 compare
R2A control with 0.2% methanol +0.2 +0.7 compare
R2A control with 0.2% methanol -0.2 -0.7 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.1 +0.4 compare
R2A control with 0.2X Vogels -0.2 -0.6 compare
R2A control with 0.2X Vogels -0.0 -0.1 compare
R2A control with 0.2X Vogels +0.4 +2.4 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.1 +0.5 compare
24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.1 +0.4 compare
24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.2 +1.0 compare
24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -0.0 -0.1 compare
40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -0.0 -0.2 compare
40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. -0.1 -0.3 compare
48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.1 -0.3 compare
48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.1 +0.4 compare
48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.2 +0.9 compare
48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.0 +0.1 compare
48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.0 +0.2 compare
72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.2 +0.6 compare
72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.3 +1.3 compare
72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +0.1 +0.4 compare
72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.0 -0.2 compare
reactor_pregrowth Adaptation in M9 media timecourse 1; day 2 -0.2 -1.1 compare
Adaptation in M9 media timecourse 1; day 3 -0.2 -1.1 compare
Adaptation in M9 media timecourse 2; day 3 +0.1 +0.7 compare
Adaptation in M9 media timecourse 3; day 2 +0.0 +0.2 compare
Adaptation in M9 media timecourse 3; day 3 -0.2 -0.9 compare
Adaptation in M9 media timecourse 4; day 2 +0.0 +0.2 compare
Adaptation in M9 media timecourse 4; day 3 -0.1 -0.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3 -0.8 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.1 -0.3 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.2 -1.0 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.1 -0.3 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.2 -0.8 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.9 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -2.0 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.2 -0.9 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.1 -0.3 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.2 -0.5 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.1 -0.7 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3 -1.2 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3 -1.3 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.2 -1.3 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.2 -0.9 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3 -1.7 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.1 -0.6 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.2 -0.7 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.3 -0.9 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.1 +0.6 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.1 +0.3 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.1 -0.5 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.3 -0.9 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.2 -0.6 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.0 +0.1 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.2 -1.1 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.3 -1.1 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -1.8 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3 -1.3 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.2 -0.6 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.0 +0.2 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.1 -0.4 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.1 -0.2 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.0 -0.1 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.0 -0.1 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.0 +0.0 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.1 -0.4 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3 -0.8 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -1.5 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.7 -2.3 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.3 -1.4 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -1.6 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.1 -0.5 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3 -1.2 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.1 -0.4 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -1.2 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5 -2.2 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.1 -0.5 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3 -1.3 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.1 +0.2 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3 -1.0 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.0 +0.1 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.1 +0.6 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.1 +0.7 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.0 +0.1 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.0 -0.1 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.2 -1.1 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -2.4 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.3 -1.4 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3 -1.5 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5 -1.7 compare
Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3 -1.5 compare
stress 1-Pentanol 0.3 vol% -0.1 -0.4 compare
2-Ethylhexanol 0.4 vol% +0.1 +0.7 compare
2-Piperidinone 3 vol% +0.2 +0.9 compare
3-methyl-1-butanol 0.4 vol% -0.2 -0.7 compare
3-methyl-3-butenol (commercial) 0.25 vol% +0.1 +0.5 compare
3-methyl-3-butenol (pure) 0.25 vol% +0.2 +1.0 compare
6-methoxy-2(3H)-benzoxazolone 0.5 mM -0.1 -0.7 compare
6-methoxy-2(3H)-benzoxazolone 0.5 mM +0.1 +0.5 compare
6-methoxy-2(3H)-benzoxazolone 1.2 mM -0.2 -0.9 compare
6-methoxy-2(3H)-benzoxazolone 1.2 mM +0.0 +0.1 compare
6-methoxy-2(3H)-benzoxazolone 2.5 mM -0.0 -0.3 compare
6-methoxy-2(3H)-benzoxazolone 2.5 mM +0.1 +0.4 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 1 -0.0 -0.1 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 1 +0.0 +0.2 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 2 +0.1 +0.9 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 1 -0.1 -0.6 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 -0.0 -0.2 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 +0.2 +1.0 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2 +0.1 +0.8 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2 +0.0 +0.3 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 -0.0 -0.0 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 +0.0 +0.0 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2 -0.1 -0.7 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1 -0.1 -0.8 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1 -0.1 -0.4 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2 +0.1 +0.4 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1 +0.1 +0.7 compare
TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1 +0.2 +1.0 compare
Apigenin 50 ug/ml -0.0 -0.1 compare
Apigenin 50 ug/ml +0.1 +0.5 compare
Apigenin 100 ug/ml -0.0 -0.1 compare
Apigenin 100 ug/ml -0.0 -0.1 compare
Butanol 0.6 vol% +0.1 +0.4 compare
Butyrolactam 2 vol% +0.2 +0.7 compare
MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.5 -2.3 compare
MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.6 -2.6 compare
MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.2 -0.8 compare
MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.3 -1.2 compare
Cholinium alpha ketoglutarate 10 vol% +0.1 +0.8 compare
Cholinium aspartate 10 vol% -0.2 -0.8 compare
Cholinium dihydrogen phosphate 10 vol% -0.1 -0.6 compare
Cholinium glutamate 10 vol% -0.0 -0.1 compare
Cholinium lysinate 10 vol% +0.1 +0.4 compare
Growth with Chloride 200 mM; with MOPS +0.4 +1.1 compare
Growth with Chloride 500 mM; with MOPS +0.1 +0.4 compare
Growth with Chloride 500 mM; with MOPS +0.3 +1.3 compare
Growth with Chloride 500 mM; with MOPS +0.2 +0.8 compare
Growth with Chloride 500 mM; with MOPS -0.3 -1.2 compare
Growth with Chloride 500 mM; with MOPS +0.1 +0.2 compare
Growth with Chloride 500 mM; with MOPS +0.2 +0.8 compare
Growth with Chloride 200 mM +0.5 +2.0 compare
Growth with Chloride 500 mM +0.1 +0.5 compare
Growth with Chloride 500 mM +0.4 +1.6 compare
Growth with Chloride 500 mM +0.3 +0.9 compare
Dimethyl Sulfoxide 1 vol% -0.5 -3.5 compare
Dimethyl Sulfoxide 1 vol% -0.1 -0.8 compare
Formaldehyde 0.03125 vol% +0.4 +1.8 compare
R2A with Fusaric 120 ug/mL +0.1 +0.3 compare
R2A with Fusaric 120 ug/mL -0.1 -0.2 compare
R2A with Fusaric 120 ug/mL -0.1 -0.6 compare
R2A with Fusaric 120 ug/mL +0.4 +1.5 compare
R2A with Fusaric 120 ug/mL -0.1 -0.6 compare
R2A with Fusaric 240 ug/mL -0.3 -1.5 compare
R2A with Fusaric 240 ug/mL -0.0 -0.1 compare
R2A with Fusaric 240 ug/mL -0.2 -0.8 compare
R2A with Fusaric 240 ug/mL -0.6 -1.8 compare
R2A with Fusaric 240 ug/mL -0.0 -0.0 compare
R2A with Fusaric 480 ug/mL -0.1 -0.5 compare
R2A with Fusaric 480 ug/mL +0.2 +0.7 compare
R2A with Fusaric 480 ug/mL +0.1 +0.4 compare
R2A with Fusaric 480 ug/mL -0.0 -0.2 compare
R2A with Fusaric 480 ug/mL -0.1 -0.3 compare
R2A with Fusaric 480 ug/mL -0.0 -0.1 compare
Geraniol 1 vol% +0.2 +0.8 compare
Isobutyl alcohol 0.6 vol% -0.2 -0.6 compare
limonene 10 vol% -0.1 -0.4 compare
MOPS minimal media_Glucose20mM with Lithium chloride 200 mM -0.1 -0.6 compare
MOPS minimal media_Glucose20mM with Lithium chloride 200 mM +0.0 +0.1 compare
MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL +0.1 +0.4 compare
MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL -0.5 -2.6 compare
pinene 10 vol% -0.2 -1.1 compare
MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL -0.0 -0.1 compare
MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL -0.2 -0.9 compare
R2A with Polymyxin B sulfate 0.001 mg/ml -0.2 -0.9 compare
R2A with Polymyxin B sulfate 0.001 mg/ml +0.1 +0.4 compare
R2A with Polymyxin B sulfate 0.001 mg/ml +0.1 +0.6 compare
R2A with Polymyxin B sulfate 0.001 mg/ml -0.3 -1.0 compare
R2A with Polymyxin B sulfate 0.002 mg/ml -0.1 -0.3 compare
NaCl stress 25mM -0.0 -0.3 compare
NaCl stress 25mM -0.1 -0.7 compare
NaCl stress 85 mM -0.2 -1.2 compare
NaCl stress 85 mM -0.0 -0.2 compare
MOPS minimal media_Glucose20mM with Chloride 200 mM +0.1 +0.2 compare
MOPS minimal media_Glucose20mM with Chloride 200 mM -0.3 -1.4 compare
NaCl stress 250 mM +0.1 +0.4 compare
NaCl stress 250 mM -0.0 -0.0 compare
LB_noSalt with Chloride 250 mM -0.2 -1.8 compare
LB_noSalt with Chloride 250 mM +0.1 +0.6 compare
LB_noSalt with Chloride 500 mM -0.1 -0.4 compare
LB_noSalt with Chloride 500 mM -0.1 -0.7 compare
LB_noSalt with Chloride 1100 mM -0.1 -0.7 compare
LB_noSalt with Chloride 1100 mM -0.2 -1.1 compare
MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.0 -0.0 compare
MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.0 +0.1 compare
supernatant LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter +0.1 +0.3 compare
Supernatant; Brevundimonas sp. 374 spent media 0.5x +0.2 +1.1 compare
Supernatant; Burkholderia bryophila 376MFSha3.1 spent media 0.5x +0.1 +0.7 compare
Supernatant; Burkholderia bryophila 376MFSha3.1 spent media 0.5x and Ferric chloride 1 uM -0.1 -0.6 compare
Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x -0.1 -0.4 compare
Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x +0.1 +0.6 compare
Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM +0.1 +0.3 compare
Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.1 -0.5 compare
Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.1 +0.9 compare
Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.0 +0.0 compare
Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +1.5 compare
Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.1 +0.7 compare
Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.1 -0.4 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.1 -0.6 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.0 +0.0 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.1 -0.4 compare
Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.0 +0.2 compare
Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.1 -0.6 compare
Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.1 +0.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.1 +0.2 compare
R2A with Vogels_fungal_media 0.8X -0.2 -0.9 compare
R2A with Vogels_fungal_media 0.8X -0.0 -0.0 compare
R2A with Vogels_fungal_media 0.8X +0.2 +1.3 compare
temperature LB 30C -0.1 -0.5 compare
LB 30C +0.0 +0.1 compare
LB 37C +0.1 +0.9 compare
LB 37C -0.1 -0.8 compare
LB 42C +0.1 +0.5 compare
LB 42C -0.1 -1.0 compare
LB_noSalt 30C -0.1 -0.5 compare
LB_noSalt 30C -0.1 -0.5 compare
LB_noSalt 37C -0.2 -1.2 compare
LB_noSalt 37C +0.0 +0.1 compare
Growth at 30C +0.1 +0.5 compare
Growth at 30C -0.1 -0.6 compare
Growth at 30C +0.1 +0.2 compare
Growth at 25C -0.0 -0.0 compare
Growth at 25C +0.3 +0.8 compare
Growth at 34C -0.2 -0.9 compare
Growth at 34C +0.2 +0.7 compare
Growth at 34C +0.0 +0.1 compare
Growth at 10C +0.3 +1.2 compare
Growth at 10C +0.2 +1.1 compare
Growth at 10C +0.1 +0.6 compare
Growth at 30C; with MOPS +0.1 +0.3 compare
Growth at 30C; with MOPS -0.0 -0.0 compare
Growth at 30C; with MOPS -0.0 -0.1 compare
Growth at 25C; with MOPS -0.1 -0.2 compare
Growth at 25C; with MOPS +0.4 +1.5 compare
Growth at 10C; with MOPS -0.1 -0.5 compare
Growth at 10C; with MOPS +0.3 +1.4 compare
Growth at 10C; with MOPS -0.2 -0.8 compare
temperature shift Temperature shift 30_to_25 -0.1 -0.4 compare
Temperature shift 30_to_25 -0.4 -1.1 compare
Temperature shift 30_to_25 +0.6 +2.1 compare
Temperature shift 10_to_25 +0.3 +1.1 compare
Temperature shift 10_to_25 +0.5 +2.1 compare
Temperature shift 10_to_25 +0.1 +0.6 compare
Temperature shift 30_to_34 +0.1 +0.6 compare
Temperature shift 30_to_21 +0.0 +0.1 compare
Temperature shift 30_to_21 +0.1 +0.7 compare
Temperature shift 30_to_10 +0.3 +1.4 compare
Temperature shift 30_to_10 +0.1 +0.5 compare
Temperature shift 10_to_21 +0.4 +1.8 compare
Temperature shift 30_to_34 +0.1 +0.7 compare
Temperature shift 30_to_34 -0.0 -0.1 compare
Temperature shift 30_to_21 -0.1 -0.6 compare
Temperature shift 30_to_10 +0.2 +1.0 compare
Temperature shift 10_to_21 +0.1 +0.6 compare
Temperature shift 10_to_21 +0.6 +2.6 compare
Temperature shift 10_to_30 -0.4 -1.2 compare
Temperature shift 10_to_30 +0.1 +0.5 compare
Temperature shift 10_to_30 +0.0 +0.2 compare
Temperature shift 10_to_34 +0.1 +0.7 compare
Temperature shift 10_to_34 +0.0 +0.0 compare
Temperature shift 10_to_34 -0.1 -0.6 compare
Temperature shift 30_to_4 +0.1 +0.3 compare
Temperature shift 30_to_4 +0.3 +1.7 compare
Temperature shift 30_to_4 +0.6 +3.0 compare
Temperature shift 30_to_25; with MOPS -0.2 -0.8 compare
Temperature shift 30_to_25; with MOPS +0.1 +0.3 compare
Temperature shift 30_to_25; with MOPS +0.2 +0.8 compare
Temperature shift 10_to_25; with MOPS +0.6 +2.0 compare
Temperature shift 10_to_25; with MOPS +0.3 +1.0 compare
Temperature shift 10_to_25; with MOPS -0.0 -0.1 compare
Temperature shift 30_to_34; with MOPS -0.3 -0.8 compare
Temperature shift 30_to_34; with MOPS +0.2 +0.6 compare
Temperature shift 30_to_21; with MOPS -0.1 -0.2 compare
Temperature shift 30_to_21; with MOPS +0.6 +1.9 compare
Temperature shift 30_to_10; with MOPS +0.2 +0.9 compare
Temperature shift 30_to_10; with MOPS +0.5 +1.9 compare
Temperature shift 30_to_10; with MOPS +0.2 +0.9 compare
Temperature shift 10_to_21; with MOPS +0.0 +0.1 compare
Temperature shift 10_to_21; with MOPS +0.2 +0.7 compare
Temperature shift 10_to_21; with MOPS +0.0 +0.0 compare
Temperature shift 10_to_30; with MOPS +0.5 +2.1 compare
Temperature shift 10_to_30; with MOPS +0.3 +1.3 compare
Temperature shift 10_to_30; with MOPS -0.4 -1.5 compare
Temperature shift 10_to_34; with MOPS +0.1 +0.6 compare
Temperature shift 10_to_34; with MOPS -0.0 -0.0 compare
Temperature shift 10_to_34; with MOPS +0.1 +0.2 compare
Temperature shift 30_to_4; with MOPS -0.3 -1.0 compare
Temperature shift 30_to_4; with MOPS +0.3 +1.2 compare
Temperature shift 30_to_4; with MOPS +0.2 +1.0 compare
time series Timeseries; NC condition; Bioreplicate 1; Time 3hrs; Measurement -0.3 -1.3 compare
Timeseries; NC condition; Bioreplicate 1; Time 4hrs; Measurement +0.1 +0.9 compare
Timeseries; NC condition; Bioreplicate 1; Time 4hrs; Measurement -0.0 -0.0 compare
Timeseries; NC condition; Bioreplicate 1; Time 5hrs; Measurement -0.0 -0.1 compare
Timeseries; NC condition; Bioreplicate 1; Time 5hrs; Measurement -0.1 -0.7 compare
Timeseries; MAX condition; Bioreplicate 1; Time 3hrs; Measurement +0.1 +0.7 compare
Timeseries; MAX condition; Bioreplicate 1; Time 4hrs; Measurement +0.3 +1.9 compare
Timeseries; MAX condition; Bioreplicate 1; Time 4hrs; Measurement -0.0 -0.2 compare
Timeseries; MAX condition; Bioreplicate 1; Time 5hrs; Measurement -0.1 -0.5 compare
Timeseries; MIN condition; Bioreplicate 1; Time 7hrs; Measurement -0.1 -0.5 compare
toxin pUC18_phdP1_pSU18T_docP1 +0.2 +0.8 compare