Fitness data for PP_1118 in Pseudomonas putida KT2440

Recombinase-related protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -0.2 -1.6 compare
carbon source D-Glucose (C) -0.2 -1.7 compare
nitrogen source NAG (N); with MOPS -0.2 -1.5 compare
nitrogen source Imidazole (N) +0.2 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.2 +1.6 compare
phage P. putida South MOI 10 +0.2 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.2 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 +1.6 compare
carbon source 3-methyl-3-buten-1-ol 0.1 vol% (C) +0.2 +1.8 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.2 +1.5 compare
pH pH 8 +0.2 +1.6 compare
nitrogen source nitrogen source nitrite 0.5mM +0.2 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.3 +1.9 compare
phage P. putida Sci Big MOI 0.1 +0.3 +2.1 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.3 +2.1 compare
phage P. putida Sci small MOI 0.1 +0.3 +2.5 compare
phage P. putida Sci small MOI 0.1 +0.6 +4.1 compare
phage P. putida PUT 7 MOI 1 +0.6 +4.4 compare
phage P. putida Missley MOI 0.1 +0.6 +4.8 compare