Fitness data for PP_1117 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source 3-Hydroxydecanoic (C) +0.5 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5 +3.4 compare
nitrogen source Propiolactam (N) +0.5 +3.3 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.5 +3.4 compare
temperature shift Temperature shift 30_to_21 +0.6 +3.4 compare
temperature shift Temperature shift 30_to_21 +0.6 +4.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.2 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.6 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +2.5 compare
nitrogen source 2,6-diaminopimelic (N) +0.6 +3.4 compare
phage P. putida PUT 7 MOI 1 +0.6 +3.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +3.0 compare
nitrogen source Propiolactam (N) +0.7 +4.0 compare
phage P. putida Sci small MOI 0.1 +0.8 +4.0 compare
nitrogen source 2,6-diaminopimelic (N) +0.8 +4.5 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +0.9 +5.6 compare
phage P. putida Sci Big MOI 0.1 +0.9 +4.7 compare
phage P. putida Missley MOI 0.1 +0.9 +5.3 compare
phage P. putida Sci small MOI 0.1 +0.9 +5.0 compare