Fitness data for PP_1093 in Pseudomonas putida KT2440

putative electron transport complex protein
SEED: Electron transport complex protein RnfE
KEGG: electron transport complex protein RnfE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source 4-Methyl-2-oxopentanoic (C) -0.9 -3.4 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.9 compare
carbon source ferulate (C); with MOPS -0.6 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.0 compare
nitrogen source Ammonium chloride (N) -0.6 -1.7 compare
temperature shift Temperature shift 30_to_25 -0.5 -1.5 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.8 compare
pH Growth at pH6 and (C) Trisodium citrate -0.5 -1.8 compare
temperature shift Temperature shift 30_to_25 -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.4 compare
temperature shift Temperature shift 30_to_10 -0.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.6 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.5 +2.2 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.6 +2.5 compare
temperature Growth at 30C; with MOPS +0.7 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.7 +2.2 compare