Fitness data for PP_1060 in Pseudomonas putida KT2440

putative Glutamate synthase, large subunit
SEED: Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.7 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.7 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -2.3 compare
stress Growth with Chloride 500 mM; with MOPS -0.7 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -2.8 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.6 -1.6 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.5 -2.5 compare
carbon source 5-Aminovaleric 10 mM (C) -0.5 -2.5 compare
nitrogen source no extra (N); with MOPS -0.5 -1.6 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.5 -2.4 compare
carbon source D-Glucose (C) -0.5 -1.5 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.2 compare
carbon source Vanillin (C) +0.6 +3.7 compare
nitrogen source nitrogen source nitrite 1mM +0.6 +2.2 compare
nitrogen source nitrogen source nitrate 5mM +0.6 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.9 compare
phage PUT 8 MOI 1 +0.6 +1.9 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +2.0 compare