Fitness data for PP_1054 in Pseudomonas putida KT2440

Type II secretion pathway protein XcpZ
SEED: Type II secretion pathway protein XcpZ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.1)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -4.5 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.9 -2.0 compare
carbon source D-Glucaric (C) -3.8 -2.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -3.7 -2.3 compare
phage P. putida Missley MOI 0.1 -3.2 -2.0 compare
pH D-Glucose (C) pH 6 -3.0 -1.9 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -3.0 -2.1 compare
carbon source Mucic (C) -3.0 -2.5 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -2.9 -2.0 compare
nitrogen source D-2-Aminobutyric (N) -2.9 -1.1 compare
pH pH 9 -2.7 -2.3 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -2.6 -1.7 compare
temperature shift Temperature shift 30_to_25; with MOPS -2.6 -1.9 compare
stress MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL -2.6 -1.9 compare
carbon source carbon source 4-vinylphenol 0.1 mM -2.4 -2.5 compare
carbon source butyrate (C) -2.3 -1.7 compare
nitrogen source nitrite (N) -2.2 -2.4 compare
stress Growth with Chloride 500 mM; with MOPS -2.1 -2.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +2.4 +3.2 compare
nitrogen source D-2-Aminobutyric (N) +2.4 +1.6 compare