Fitness data for PP_1053 in Pseudomonas putida KT2440

Type II secretion pathway protein XcpY
SEED: General secretion pathway protein L (Pullulanase secretion protein pulL)
KEGG: general secretion pathway protein L

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.3 -2.7 compare
nitrogen source Propiolactam (N) -1.2 -2.1 compare
pH Growth at pH6 and (C) Trisodium citrate -0.9 -1.8 compare
pH Growth at pH9 and (C) D-Glucose -0.8 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -1.5 compare
stress Growth with Chloride 500 mM; with MOPS -0.8 -2.4 compare
carbon source Trisodium citrate (C) -0.8 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -1.8 compare
carbon source 4-Aminobutyric 10 mM (C) -0.7 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7 -2.5 compare
pH D-Glucose (C) pH 6 -0.7 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.7 compare
phage P. putida Missley MOI 0.1 -0.6 -1.2 compare
carbon source propionate (C) -0.6 -2.4 compare
phage P. put South MOI 1 -0.6 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.1 compare
nitrogen source nitrate (N) +0.7 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.0 compare
pH Valerolactone (C) pH 6.5 +1.0 +2.7 compare