Fitness data for PP_1048 in Pseudomonas putida KT2440

putative protein secretion protein for export
SEED: General secretion pathway protein F / Type II secretory pathway, component PulF
KEGG: general secretion pathway protein F

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
temperature shift Temperature shift 10_to_25; with MOPS -6.8 -2.9 compare
carbon source ferulate (C); with MOPS -4.2 -2.4 compare
nitrogen source 2,6-diaminopimelic (N) -4.1 -2.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -3.8 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -3.1 -2.6 compare
carbon source 1,3-Butandiol (C) -2.9 -2.0 compare
temperature shift Temperature shift 30_to_25; with MOPS -2.8 -2.4 compare
temperature Growth at 25C -2.6 -1.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -2.5 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate -2.4 -1.6 compare
carbon source acetate (C) -2.3 -1.4 compare
carbon source D-Glucuronic gamma lactone (C) -1.8 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.8 -2.4 compare
pH Growth at pH9 and (C) Trisodium citrate -1.6 -1.4 compare
carbon source 2,3-Butanediol (C) -1.6 -1.8 compare
carbon source rac-3-Hydroxypentanoic Acid (C) -1.5 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -2.3 compare
phage P. put PUT 10 MOI 0.1 -1.5 -1.9 compare
phage P. put South MOI 10 +1.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.7 +1.4 compare