Fitness data for PP_1044 in Pseudomonas putida KT2440

Lipoprotein UxpA
SEED: lipoprotein UxpA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -1.7 compare
pH Growth at pH6 and (C) D-Glucose -1.0 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -2.6 compare
carbon source ferulate (C); with MOPS -0.9 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.4 compare
nitrogen source 2,6-diaminopimelic (N) -0.8 -1.3 compare
nitrogen source nitrogen source nitrite 0.5mM -0.7 -1.6 compare
nitrogen source no extra (N) -0.7 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -2.5 compare
pH D-Glucose (C) pH 6 -0.7 -2.1 compare
phage P. put PUT 10 MOI 10 +0.7 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.7 +1.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.5 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.7 +2.8 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.9 +2.5 compare
temperature Growth at 25C; with MOPS +1.0 +2.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +1.0 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.9 +1.7 compare