Fitness data for PP_1042 in Pseudomonas putida KT2440

Type II secretion system protein K
SEED: General secretion pathway protein K
KEGG: general secretion pathway protein K

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source nitrogen source nitrite 0.5mM -1.0 -2.0 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.9 -2.3 compare
phage P. putida Missley MOI 0.1 -0.9 -1.2 compare
nitrogen source Hydantoin (N) -0.8 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.7 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.7 +2.0 compare
temperature shift Temperature shift 30_to_10 +0.7 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.2 compare
pH Growth at pH6 and (C) D-Glucose +0.8 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.8 +1.1 compare
pH Growth at pH8 and (C) D-Glucose +0.8 +3.5 compare
pH Valerolactone (C) pH 6.5 +0.8 +3.3 compare
nitrogen source Urea (N); with MOPS +0.8 +1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.9 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +1.5 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.9 +2.7 compare
pH Growth at pH6 and (C) D-Glucose +0.9 +1.8 compare
temperature Growth at 30C; with MOPS +0.9 +2.1 compare
temperature shift Temperature shift 30_to_21; with MOPS +1.3 +3.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +1.0 compare