Fitness data for PP_1001 in Pseudomonas putida KT2440

arginine deiminase
SEED: Arginine deiminase (EC 3.5.3.6)
KEGG: arginine deiminase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.3)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -3.4 -6.2 compare
pH Growth at pH6 and (C) Trisodium citrate -3.1 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.0 -3.6 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -3.0 -5.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.9 -5.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.8 -4.0 compare
r2a control R2A control -2.8 -7.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.7 -3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -2.7 -7.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -2.6 -4.1 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -2.6 -6.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -2.5 -5.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.4 -5.2 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -2.4 -5.6 compare
lb outgrowth control more dilute start LB outgrowth control more dilute start -2.4 -3.6 compare
r2a control R2A control -2.4 -4.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -2.4 -4.7 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -2.3 -5.6 compare
stress R2A with Fusaric 480 ug/mL -2.3 -4.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -2.3 -3.5 compare