Fitness data for PP_0944 in Pseudomonas putida KT2440

fumarate hydratase (class 2)
SEED: Fumarate hydratase class II (EC 4.2.1.2)
KEGG: fumarate hydratase, class II

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -2.4 compare
nitrogen source NAG (N); with MOPS -0.9 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.8 -2.8 compare
phage P. putida Sci Big MOI 0.1 -0.8 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -2.6 compare
phage P. putida Missley MOI 0.1 -0.6 -1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.2 compare
phage P. putida PUT 7 MOI 1 -0.5 -1.5 compare
phage P. put South MOI 10 -0.5 -1.6 compare
carbon source Ferulic Acid (C) +0.5 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +1.4 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +1.6 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.5 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.1 compare
carbon source carbon source D-Glucose 55.5 mM +0.6 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.1 compare
carbon source Lignin Monomers (C) +0.7 +4.5 compare