Fitness data for PP_0917 in Pseudomonas putida KT2440

Chromosome initiation inhibitor
SEED: Chromosome initiation inhibitor
KEGG: LysR family transcriptional regulator, chromosome initiation inhibitor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
micoeukaryotes Tetrahymena sp., Mixed culture-2 -3.6 -4.3 compare
micoeukaryotes C.elegans, mixed culture-2 -2.0 -4.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -2.0 -5.3 compare
micoeukaryotes C.elegans, mixed culture-1 -1.7 -3.7 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.6 -3.3 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -1.5 -3.8 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.4 -2.5 compare
stress R2A with Fusaric 480 ug/mL -1.2 -4.1 compare
stress R2A with Fusaric 480 ug/mL -1.0 -2.2 compare
stress R2A with Fusaric 480 ug/mL -1.0 -3.3 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.0 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.0 -2.0 compare
stress R2A with Fusaric 480 ug/mL -1.0 -3.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.9 -1.9 compare
pH Growth at pH6 and (C) Trisodium citrate -0.7 -2.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -1.9 compare
pH pH 4 +0.7 +1.8 compare
stress Butanol 0.6 vol% +0.8 +2.8 compare
carbon source butyrate (C) +0.8 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.0 +2.7 compare