Fitness data for PP_0903 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: SAM-dependent methyltransferases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -2.6 -2.6 compare
carbon source ferulate (C); with MOPS -2.0 -2.7 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -1.8 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.6 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.4 -1.6 compare
stress NaCl stress 250 mM -1.3 -2.8 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.1 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.9 compare
carbon source ferulate (C); with MOPS -1.0 -1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -3.1 compare
nitrogen source Urea (N) +0.8 +2.5 compare
carbon source Valeric (C) +0.8 +3.0 compare
nitrogen source nitrate (N) +1.0 +4.5 compare
phage P. putida Sci small MOI 0.1 +1.1 +3.0 compare
phage P. putida Sci small MOI 0.1 +1.3 +2.4 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +4.2 +7.5 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +4.5 +13.0 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +4.9 +11.9 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +5.1 +6.4 compare