Fitness data for PP_0888 in Pseudomonas putida KT2440

Photosynthetic apparatus regulatory protein RegA
SEED: Dna binding response regulator PrrA (RegA)
KEGG: two-component system, response regulator RegA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.4)


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group condition fitness t score  
nitrogen source Propandiamine (N) -4.6 -3.1 compare
nitrogen source Propandiamine (N) -4.4 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -4.3 -2.6 compare
nitrogen source Ammonium chloride (N) -4.1 -2.4 compare
temperature Growth at 30C; with MOPS -4.1 -2.2 compare
carbon source Tween 20 (C) -4.1 -2.2 compare
carbon source D-Glucose (C); with MOPS -4.1 -2.3 compare
pH Growth at pH7 and (C) D-Glucose -4.0 -1.9 compare
carbon source acetate (C) -3.9 -2.2 compare
nitrogen source NAG (N); with MOPS -3.9 -1.9 compare
nitrogen source NAG (N); with MOPS -3.9 -1.8 compare
nitrogen source Putrescine (N) -3.8 -3.7 compare
carbon source Vanillin (C) -3.7 -2.5 compare
carbon source Protocatechuic Acid (C) -3.7 -2.5 compare
carbon source propionate (C) -3.6 -2.5 compare
carbon source Glutaric (C) -3.5 -3.4 compare
carbon source ferulate (C); with MOPS -3.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.4 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -3.4 -3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -3.4 -2.3 compare