Fitness data for PP_0885 in Pseudomonas putida KT2440

dipeptide ABC transporter - periplasmic binding protein
SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
KEGG: dipeptide transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Valerolactone (C) -0.8 -3.5 compare
carbon source Valerolactone (C) -0.6 -3.2 compare
carbon source carbon source D-Glucose 55.5 mM -0.6 -2.4 compare
pH Valerolactone (C) pH 6.5 -0.5 -2.8 compare
pH Valerolactone (C) pH 6.5 -0.5 -3.1 compare
nitrogen source D-2-Aminobutyric (N) -0.5 -2.4 compare
carbon source D-Glucose (C) -0.4 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.5 compare
pH pH 7 -0.4 -1.9 compare
nitrogen source DL-2-Aminobutyric (N) -0.4 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.7 compare
carbon source Delta-Nonalactone (C) +0.4 +2.6 compare
carbon source ferulate (C); with MOPS +0.5 +2.5 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.5 +2.7 compare
carbon source Delta-Decalactone (C) +0.5 +3.1 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.5 +4.0 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.5 +3.1 compare
carbon source 1-Pentanol (C) +0.8 +5.8 compare