Fitness data for PP_0884 in Pseudomonas putida KT2440

dipeptide ABC transporter - periplasmic binding protein
SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.7 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5 -3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5 -2.7 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.8 compare
nitrogen source NAG (N); with MOPS -0.4 -1.3 compare
phage P. putida Missley MOI 0.1 -0.4 -1.9 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.5 compare
nitrogen source Urea (N) +0.4 +2.0 compare
carbon source ferulate (C); with MOPS +0.4 +1.7 compare
pH pH 4 +0.4 +1.8 compare
micoeukaryotes C.elegans, mixed culture-2 +0.4 +2.8 compare
stress Formaldehyde 0.03125 vol% +0.4 +2.5 compare
micoeukaryotes C.elegans, mixed culture-1 +0.4 +3.0 compare
carbon source 1-Pentanol (C) +0.4 +3.1 compare
pH pH 9 +0.5 +2.3 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.6 +4.1 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.7 +4.5 compare