Fitness data for PP_0851 in Pseudomonas putida KT2440

Type IV pili biogenesis protein PilF
SEED: Type IV pilus biogenesis protein PilF
KEGG: type IV pilus assembly protein PilF

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -3.3 compare
carbon source Valerolactone (C) -0.6 -2.3 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -0.5 -3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.6 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -0.5 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.4 -2.3 compare
no stress control Growth with no stress +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
carbon source Delta-Decalactone (C) +0.4 +2.9 compare
temperature Growth at 25C +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.0 compare
pH Growth at pH7 and (C) Trisodium citrate +0.5 +2.2 compare
phage P. putida Sci small MOI 0.1 +0.5 +1.8 compare
carbon source Delta-Nonalactone (C) +0.5 +3.2 compare
micoeukaryotes C.elegans, mixed culture-2 +0.6 +2.7 compare
micoeukaryotes C.elegans, mixed culture-1 +0.6 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.7 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.9 +5.4 compare