Fitness data for PP_0821 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: FIG00961566: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -1.5 -2.4 compare
pH Growth at pH7 and (C) D-Glucose -1.5 -1.5 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -1.0 -2.7 compare
temperature shift Temperature shift 10_to_30; with MOPS -1.0 -2.1 compare
nitrogen source Hydantoin (N) -0.9 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -1.1 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.8 -2.8 compare
nitrogen source Propiolactam (N) -0.8 -2.9 compare
carbon source Protocatechuic Acid (C) +0.8 +2.4 compare
nitrogen source D-2-Aminobutyric (N) +0.8 +1.1 compare
phage PUT8 MOI 0.1 +0.9 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +1.1 compare
nitrogen source Ammonium chloride (N) +0.9 +4.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.9 +2.4 compare
carbon source Myristic (C) +0.9 +2.9 compare
pH Growth at pH6 and (C) D-Glucose +0.9 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +1.0 +1.4 compare
carbon source Tween 20 (C) +1.2 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.8 +2.2 compare