Fitness data for PP_0771 in Pseudomonas putida KT2440

mRNA interferase
SEED: Programmed cell death toxin ChpB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source carbon source 4-vinylphenol 0.1 mM -0.9 -1.9 compare
nitrogen source nitrogen source nitrate 20mM -0.8 -1.9 compare
phage P. putida Sci Big MOI 0.1 -0.8 -1.0 compare
phage P. putida South MOI 10 -0.8 -1.6 compare
pH Valerolactone (C) pH 6.5 -0.7 -1.7 compare
carbon source L-Leucine (C) -0.7 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7 -2.2 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.7 -1.9 compare
carbon source Myristic (C) -0.6 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -1.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.6 -2.1 compare
nitrogen source Propiolactam (N) -0.6 -1.8 compare
carbon source Trisodium citrate 10 mM (C) -0.6 -1.8 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.6 -2.7 compare
pH Growth at pH7 and (C) Trisodium citrate +0.6 +1.8 compare
temperature shift Temperature shift 10_to_30 +0.7 +3.6 compare
carbon source ferulate (C); with MOPS +0.7 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.3 compare