Fitness data for PP_0727 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)
KEGG: putative glutamine amidotransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -2.3 compare
temperature shift Temperature shift 30_to_10; with MOPS -0.5 -2.6 compare
nitrogen source Urea (N) -0.4 -2.0 compare
carbon source Lauric (C) -0.4 -2.1 compare
pH Growth at pH9 and (C) Trisodium citrate -0.4 -2.0 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.4 compare
carbon source Tween 20 (C) -0.4 -1.6 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.4 -1.9 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.3 compare
pH Growth at pH6 and (C) Trisodium citrate -0.3 -1.6 compare
pH Growth at pH8 and (C) Trisodium citrate -0.3 -1.9 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.3 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.4 compare
carbon source ferulate (C); with MOPS +0.4 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.8 compare
carbon source L-Lysine (C) +0.4 +2.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.0 compare
phage P. putida Sci small MOI 0.1 +0.5 +2.3 compare
carbon source 4-Aminobutyric 10 mM (C) +0.5 +2.6 compare