Fitness data for PP_0716 in Pseudomonas putida KT2440

HlyD family secretion protein
SEED: Membrane fusion component of tripartite multidrug resistance system

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
carbon source carbon source 3-O-methyl-glucose 50 mM -0.5 -2.3 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.5 -2.8 compare
no stress control Growth with no stress -0.5 -2.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.5 -2.1 compare
pH D-Glucose (C) pH 6 -0.4 -2.2 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -0.4 -2.1 compare
phage P. putida PUT 7 MOI 1 -0.4 -1.5 compare
stress Growth with Chloride 500 mM -0.4 -2.1 compare
nitrogen source 2,6-diaminopimelic (N) -0.3 -2.0 compare
carbon source 1,3-Butandiol (C) -0.3 -1.4 compare
nitrogen source Urea (N) -0.3 -1.5 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.3 -1.8 compare
temperature shift Temperature shift 30_to_10; with MOPS -0.3 -1.7 compare
pH Growth at pH6 and (C) Trisodium citrate +0.3 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.3 +1.9 compare
stress Growth with Chloride 500 mM; with MOPS +0.4 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +1.8 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.4 compare