Fitness data for PP_0699 in Pseudomonas putida KT2440

Transporter, LysE family
SEED: L-lysine permease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)

group	condition	fitness	t score
pH	Growth at pH7 and (C) D-Glucose	-1.6	-2.1	compare
nitrogen source	D-2-Aminobutyric (N)	-0.7	-1.7	compare
no phage control	Time6-nophage	-0.7	-3.0	compare
phage	PUT8 MOI 0.1	-0.7	-2.2	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7	-2.7	compare
nitrogen source	D-2-Aminobutyric (N)	-0.7	-1.7	compare
pH	Growth at pH8 and (C) D-Glucose	-0.7	-2.0	compare
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.7	-3.0	compare
nitrogen source	Urea (N)	-0.6	-1.2	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6	-2.5	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.6	-2.1	compare
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.6	-1.8	compare
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.6	-2.2	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.5	-2.5	compare
stress	Growth with Chloride 500 mM; with MOPS	+0.5	+2.7	compare
temperature shift	Temperature shift 30_to_25; with MOPS	+0.6	+2.5	compare
pH	Growth at pH6 and (C) D-Glucose	+0.6	+1.4	compare
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6	+1.1	compare
temperature shift	Temperature shift 10_to_25; with MOPS	+0.6	+2.5	compare
nitrogen source	2,6-diaminopimelic (N)	+1.1	+2.5	compare