Fitness data for PP_0684 in Pseudomonas putida KT2440

FKBP-type peptidyl-prolyl cis-trans isomerase
SEED: FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)
KEGG: FKBP-type peptidyl-prolyl cis-trans isomerase FklB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -3.1 compare
stress Growth with Chloride 500 mM -0.9 -3.4 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.9 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.9 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.7 -2.3 compare
stress Growth with Chloride 500 mM; with MOPS -0.7 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.1 compare
stress Growth with Chloride 500 mM; with MOPS -0.6 -2.3 compare
temperature Growth at 30C -0.6 -2.0 compare
carbon source Tween 20 (C) -0.6 -1.3 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.6 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -1.5 compare
temperature shift Temperature shift 10_to_34; with MOPS -0.6 -2.7 compare
carbon source L-Phenylalanine 5 mM (C) -0.6 -2.1 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6 +2.0 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.6 +2.0 compare
carbon source L-Lysine (C) +0.6 +2.3 compare
pH pH 4 +0.6 +2.1 compare
pH pH 5 +0.7 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +2.9 compare