Fitness data for PP_0668 in Pseudomonas putida KT2440

putative Transmembrane sensor
SEED: Iron siderophore sensor protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -2.2 -3.4 compare
nitrogen source Urea (N); with MOPS -1.5 -2.3 compare
phage P. putida Sci small MOI 0.1 -1.3 -3.5 compare
pH Growth at pH8 and (C) Trisodium citrate -1.1 -1.9 compare
no stress control Growth with no stress -1.0 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -2.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay -0.9 -3.0 compare
carbon source D-Glucose (C) -0.9 -3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -2.6 compare
stress Growth with Chloride 500 mM; with MOPS -0.8 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.8 -1.8 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.8 -1.9 compare
carbon source Crotonic (C) -0.7 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -1.1 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -2.4 compare
pH Growth at pH8 and (C) Trisodium citrate -0.6 -2.2 compare
nitrogen source Propiolactam (N) -0.6 -1.7 compare
phage P. put South MOI 10 -0.6 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -1.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.6 -1.7 compare