Fitness data for PP_0663 in Pseudomonas putida KT2440

Transcriptional regulator, AsnC family
SEED: Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.5 -3.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -1.5 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.3 -2.2 compare
carbon source 2-Methylbutanoic (C) -1.2 -2.3 compare
carbon source DL-3-Hydroxybutyric (C) -1.1 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -3.0 compare
phage P. putida Sci Big MOI 0.1 -1.1 -1.7 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.0 -1.8 compare
pH pH 7 +1.0 +2.1 compare
carbon source carbon source Glycerol 108.6 mM +1.0 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.4 compare
carbon source carbon source Bisabolol 45 mM +1.1 +2.7 compare
pH pH 5 +1.1 +1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +1.2 +1.8 compare
carbon source carbon source 4-vinylphenol 0.1 mM +1.2 +1.9 compare
pH pH 9 +1.3 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.4 +1.1 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +1.4 +2.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +1.5 +3.4 compare
carbon source carbon source 4-vinylphenol 0.01 mM +1.7 +3.6 compare