Fitness data for PP_0642 in Pseudomonas putida KT2440

conserved membrane protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
nitrogen source L-Valine (N) -2.8 -8.1 compare
nitrogen source L-Valine (N) -2.7 -7.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.5 -2.9 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -2.5 -5.2 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -1.8 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.8 -3.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.7 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.6 -2.7 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -1.4 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.3 -2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -2.6 compare
carbon source L-Leucine (C) -1.2 -1.8 compare
nitrogen source nitrogen source nitrite 0.5mM -1.1 -2.8 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.1 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.1 -2.1 compare
nitrogen source Ammonium chloride (N) +1.1 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.3 +1.9 compare
carbon source L-Valine (C) +1.8 +7.2 compare
carbon source L-Valine (C) +1.9 +12.5 compare
carbon source L-Valine (C) +2.0 +9.0 compare