Fitness data for PP_0640 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
carbon source 3-methyl-1-butanol 0.25 vol% (C) -2.1 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.0 -3.0 compare
pH Growth at pH6 and (C) Trisodium citrate -2.0 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 -3.1 compare
pH Growth at pH7 and (C) Trisodium citrate -1.5 -1.6 compare
stress Growth with Chloride 200 mM -1.5 -2.4 compare
pH Growth at pH7 and (C) D-Glucose -1.5 -1.8 compare
nitrogen source nitrogen source nitrite 1mM -1.5 -1.5 compare
nitrogen source Urea (N) -1.2 -1.8 compare
carbon source D-Glucose (C); with MOPS -1.1 -1.2 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -1.1 -2.1 compare
carbon source D-Lysine 10 mM (C) +1.1 +3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +1.1 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.3 +1.8 compare
phage P. putida Missley MOI 0.1 +1.3 +5.9 compare
phage PUT8 MOI 10 +1.3 +3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +1.3 +1.8 compare
phage P. putida Sci small MOI 0.1 +1.8 +5.3 compare
carbon source Lignin Monomers (C) +2.9 +15.5 compare
carbon source Lignin Monomers (C) +3.7 +21.3 compare