Fitness data for PP_0633 in Pseudomonas putida KT2440

Type 4 fimbrial assembly protein PilC
SEED: Type IV fimbrial assembly protein PilC
KEGG: type IV pilus assembly protein PilC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.3 -2.0 compare
phage P. putida PUT 7 MOI 1 -1.2 -2.4 compare
nitrogen source 2,6-diaminopimelic (N) -1.0 -1.6 compare
nitrogen source Propiolactam (N) -0.9 -2.2 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.9 -2.2 compare
phage P. put South MOI 10 -0.9 -1.1 compare
carbon source Delta-Undecalactone (C) -0.9 -2.3 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.8 -2.0 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.8 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.8 -1.6 compare
temperature Growth at 30C; with MOPS +0.7 +2.7 compare
nitrogen source Ammonium chloride (N) +0.8 +1.9 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.8 +1.5 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.8 +1.4 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.9 +3.3 compare
carbon source carbon source Glycerol 108.6 mM +0.9 +1.5 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +1.0 +2.0 compare
temperature shift Temperature shift 30_to_25; with MOPS +1.0 +2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +1.9 compare
pH pH 5 +1.2 +2.4 compare