Fitness data for PP_0632 in Pseudomonas putida KT2440

leader peptidase/N-methyltransferase
SEED: Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-)
KEGG: leader peptidase (prepilin peptidase) / N-methyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -1.2 -1.9 compare
nitrogen source nitrate (N) -1.1 -1.5 compare
stress Growth with Chloride 200 mM; with MOPS -1.0 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.6 compare
nitrogen source Urea (N) -0.7 -2.0 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.7 -2.4 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.6 compare
temperature shift Temperature shift 10_to_30 -0.7 -2.4 compare
carbon source benzoic (C) -0.7 -3.0 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.7 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.7 +2.0 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.8 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.8 +2.0 compare
nitrogen source D-2-Aminobutyric (N) +0.9 +1.8 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.9 +2.5 compare
nitrogen source NAG (N); with MOPS +0.9 +2.0 compare
pH pH 9 +1.0 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +2.3 compare