Fitness data for PP_0626 in Pseudomonas putida KT2440

NADH dehydrogenase
SEED: NADH dehydrogenase (EC 1.6.99.3)
KEGG: NADH dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source carbon source D-Glucose 55.5 mM -1.2 -3.4 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -1.1 -4.4 compare
carbon source D-Glucose (C) -1.0 -2.3 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.9 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.4 compare
carbon source 3-Hydroxyhexanoic (C) -0.7 -5.1 compare
stress 3-methyl-1-butanol 0.4 vol% -0.6 -2.7 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.6 -2.6 compare
pH pH 4 -0.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.6 compare
pH Growth at pH7 and (C) D-Glucose -0.6 -1.4 compare
carbon source carbon source Bisabolol 45 mM -0.5 -2.3 compare
phage moi 100 Time6-phageFRS -0.5 -2.7 compare
nitrogen source nitrogen source nitrite 1mM +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.3 compare
nitrogen source nitrate (N) +0.6 +2.5 compare
carbon source acetate (C) +0.7 +2.3 compare
nitrogen source Ammonium chloride (N) +0.7 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.9 +3.6 compare