Fitness data for PP_0616 in Pseudomonas putida KT2440

Branched-chain amino acid ABC transporter, ATP binding protein
SEED: Urea ABC transporter, ATPase protein UrtD
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -1.8 -3.3 compare
nitrogen source Ammonium chloride (N) -1.5 -1.3 compare
stress Growth with Chloride 500 mM; with MOPS -1.3 -2.1 compare
pH Growth at pH9 and (C) Trisodium citrate -1.2 -2.2 compare
pH Growth at pH6 and (C) Trisodium citrate -1.1 -1.8 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.1 -1.6 compare
nitrogen source Ammonium chloride (N) -1.1 -2.2 compare
pH D-Glucose (C) pH 6 -1.0 -2.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.0 -2.0 compare
pH pH 7 -0.9 -2.5 compare
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.9 -2.3 compare
pH pH 4 +0.9 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.9 +2.8 compare
carbon source Valeric (C) +0.9 +2.3 compare
nitrogen source Hydantoin (N) +0.9 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +1.0 +1.9 compare
pH Growth at pH9 and (C) Trisodium citrate +1.0 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +1.0 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.3 compare
nitrogen source Hydantoin (N) +1.3 +2.5 compare