Fitness data for PP_0614 in Pseudomonas putida KT2440

putative N-carbamoyl-beta-alanine amidohydrolase/allantoine amidohydrolase 1
SEED: N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87)
KEGG: beta-ureidopropionase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -1.8 -3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.3 -3.4 compare
phage P. putida Sci Big MOI 0.1 -1.1 -3.7 compare
nitrogen source D-2-Aminobutyric (N) -1.0 -2.3 compare
carbon source carbon source D-Glucose 55.5 mM -1.0 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.9 -2.9 compare
carbon source D-Glucose (C) -0.9 -2.0 compare
pH Growth at pH8 and (C) D-Glucose -0.9 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.7 compare
temperature shift Temperature shift 30_to_25 -0.9 -2.1 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.9 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -3.2 compare
nitrogen source 2,6-diaminopimelic (N) -0.8 -1.2 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.7 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -2.8 compare
pH Growth at pH7 and (C) D-Glucose +0.7 +1.4 compare
pH Growth at pH6 and (C) Trisodium citrate +0.8 +2.5 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.8 +1.9 compare