Fitness data for PP_0583 in Pseudomonas putida KT2440

Transcriptional regulator, AraC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -0.9 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -1.6 compare
carbon source butyrate (C) -0.6 -1.7 compare
carbon source D-Glucose (C); with MOPS -0.6 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -2.3 compare
carbon source ferulate (C); with MOPS -0.6 -1.4 compare
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.6 -2.3 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.6 -2.6 compare
carbon source Valerolactone (C) -0.6 -1.3 compare
phage P. putida South MOI 10 -0.6 -1.3 compare
pH Growth at pH9 and (C) Trisodium citrate -0.6 -1.2 compare
temperature Growth at 25C -0.6 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.6 +2.1 compare
carbon source Glucose (C) (40mM) +0.6 +3.0 compare
carbon source Glucose (C) (20mM) +0.6 +2.4 compare
carbon source Crotonic (C) +0.7 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +2.7 compare
nitrogen source NAG (N); with MOPS +0.7 +3.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.8 compare