Fitness data for PP_0573 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Probable activation/secretion signal peptide protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -0.5 -2.5 compare
phage P. putida PUT 7 MOI 1 -0.3 -2.1 compare
temperature Growth at 25C -0.3 -2.0 compare
phage P. putida Missley MOI 0.1 -0.3 -1.9 compare
nitrogen source Ammonium chloride and TNT (N) +0.3 +2.3 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.3 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +2.1 compare
nitrogen source nitrite (N) +0.3 +2.5 compare
nitrogen source Ammonium chloride (N) +0.3 +2.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.3 +2.4 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.3 +2.5 compare
nitrogen source TNT (N) +0.3 +2.4 compare
nitrogen source Ammonium chloride and TNT (N) +0.3 +2.6 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.3 +2.0 compare
carbon source ferulate (C); with MOPS +0.3 +2.1 compare
temperature Growth at 30C; with MOPS +0.3 +2.7 compare
no stress control Growth with no stress +0.3 +2.3 compare
pH Growth at pH6 and (C) D-Glucose +0.4 +2.1 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.4 +3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +2.5 compare