Fitness data for PP_0565 in Pseudomonas putida KT2440

putative enzyme
SEED: Putative Nudix hydrolase YfcD (EC 3.6.-.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source butyrate (C) -1.5 -2.6 compare
carbon source Valeric (C) -1.4 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.2 -2.3 compare
temperature Growth at 30C; with MOPS -1.1 -1.5 compare
carbon source 4-Aminobutyric 10 mM (C) -1.1 -3.5 compare
carbon source Lauric (C) -1.0 -2.8 compare
stress Growth with Chloride 500 mM; with MOPS -1.0 -2.4 compare
phage PUT8 MOI 10 -0.9 -2.1 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.9 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.9 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -1.7 compare
pH Growth at pH7 and (C) D-Glucose +0.9 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.9 +1.6 compare
pH Valerolactone (C) pH 6.5 +0.9 +1.9 compare
nitrogen source Urea (N) +0.9 +1.8 compare
pH pH 7 +1.0 +2.0 compare
phage P. putida Missley MOI 0.1 +1.0 +1.7 compare
pH Growth at pH7 and (C) Trisodium citrate +1.1 +1.8 compare