Fitness data for PP_0555 in Pseudomonas putida KT2440

Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
SEED: Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)
KEGG: pyruvate dehydrogenase E1 component subunit alpha

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source 2,3-Butanediol (C) -3.8 -8.3 compare
carbon source 2,3-Butanediol (C) -2.6 -7.5 compare
carbon source carbon source D-Glucose 55.5 mM -1.1 -2.5 compare
pH Growth at pH7 and (C) D-Glucose -1.0 -2.5 compare
carbon source ferulate (C); with MOPS -0.8 -2.4 compare
carbon source ferulate (C); with MOPS -0.8 -2.5 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.8 -2.3 compare
carbon source D-Glucose (C) -0.7 -1.9 compare
nitrogen source nitrate (N) -0.6 -1.5 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -2.2 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.6 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -1.9 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.6 -1.7 compare
pH Growth at pH8 and (C) D-Glucose -0.6 -1.9 compare
temperature Growth at 10C; with MOPS -0.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.5 +1.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.6 compare
phage P. putida Sci Big MOI 0.1 +0.6 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.7 +2.1 compare