Fitness data for PP_0543 in Pseudomonas putida KT2440

ethanolamine ammonia-lyase, alpha-subunit
SEED: Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7)
KEGG: ethanolamine ammonia-lyase large subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source Ethanolamine (N) -3.1 -13.9 compare
nitrogen source Ethanolamine (N) -2.7 -13.1 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate -0.5 -2.3 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.9 compare
carbon source Valerolactone (C) -0.4 -2.0 compare
nitrogen source nitrate (N) -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.2 compare
stress MOPS minimal media_Glucose20mM with Lithium chloride 200 mM +0.4 +2.2 compare
pH Valerolactone (C) pH 6.5 +0.4 +1.9 compare
nitrogen source Urea (N) +0.4 +1.9 compare
phage P. putida Sci Big MOI 0.1 +0.4 +2.0 compare
nitrogen source TNT (N) +0.5 +2.7 compare
carbon source butyrate (C) +0.5 +2.2 compare
carbon source ferulate (C); with MOPS +0.5 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +2.6 compare