Fitness data for PP_0542 in Pseudomonas putida KT2440

ethanolamine ammonia-lyase, beta-subunit
SEED: Ethanolamine ammonia-lyase light chain (EC 4.3.1.7)
KEGG: ethanolamine ammonia-lyase small subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source Ethanolamine (N) -3.5 -12.0 compare
nitrogen source Ethanolamine (N) -3.0 -10.8 compare
pH Growth at pH6 and (C) D-Glucose -1.2 -3.2 compare
pH pH 8 -1.0 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -2.3 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -0.9 -3.2 compare
carbon source Trisodium citrate (C) -0.7 -2.0 compare
carbon source Nonanoic (C) -0.7 -1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -2.4 compare
nitrogen source Urea (N) -0.5 -1.5 compare
temperature Growth at 25C; with MOPS -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5 +1.6 compare
temperature shift Temperature shift 30_to_34; with MOPS +0.5 +2.1 compare
nitrogen source Urea (N); with MOPS +0.5 +2.1 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.3 compare
pH Growth at pH6 and (C) D-Glucose +0.7 +1.6 compare
nitrogen source 2,6-diaminopimelic (N) +0.7 +1.7 compare
nitrogen source nitrate (N) +0.7 +2.5 compare
pH Growth at pH7 and (C) Trisodium citrate +1.0 +2.8 compare