Fitness data for PP_0523 in Pseudomonas putida KT2440

conserved membrane protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.2 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.4 -2.1 compare
nitrogen source nitrate (N) -0.4 -1.8 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.8 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.3 -2.1 compare
carbon source ferulate (C); with MOPS -0.3 -1.7 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.3 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.3 -1.9 compare
nitrogen source nitrogen source nitrite 1mM -0.3 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +1.4 compare
carbon source ferulate (C); with MOPS +0.3 +1.5 compare
carbon source acetate (C) +0.3 +1.6 compare
nitrogen source 2,6-diaminopimelic (N) +0.3 +1.7 compare
carbon source carbon source D-Glucose 55.5 mM +0.3 +1.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.3 +2.0 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.2 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.9 +5.3 compare